Exploring the Mechanism of Action of Isorhynchophylline in Stroke Based on Network Pharmacology and Molecular Docking Technology.

IF 1.7 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS
Bifei Li, Xujie Wang, Min Qiu, Ziyang Zhang, Xiaolei Liu, Kaiwen Zhang, Xiaoe Jia, Wei Xie, Yabin Xie, Bade Ren-Gui, Rui Shi, Mulan Bao, You Liu, Guo Shao, Shuyuan Jiang
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引用次数: 0

Abstract

Introduction: This study aimed to elucidate the neuroprotective mechanism of Isorhynchophylline (IRN) in stroke.

Methods: Using network pharmacology, the action targets of IRN were predicted using the SwissTargetPrediction, HERB, and TCMIP 2.0 databases. We identified sixty-five targets common to IRN and stroke. We conducted GO and KEGG enrichment analyses using R software and constructed a compound- target- pathway- disease network. Additionally, molecular docking experiments were performed to investigate the binding interactions between IRN and its main targets. Subsequently, an oxygen-glucose deprivation/reoxygenation (OGD/R) model was established using the human neuroblastoma cell line SH-SY5Y under hypoxic conditions (1% O2). The effective working concentration of IRN was determined by measuring cell viability using the CCK-8 assay. Then, an ELISA experiment was conducted to detect the expression of inflammatory factors IL-1β and IL-10. The activity of reactive oxygen species (ROS) was measured using the dual fluorescence detection method. TUNEL staining was employed to assess the apoptosis of cells. Finally, a Western blot was used to examine the effect of IRN on EGFR and AKT expression in cells.

Results: The results of network pharmacology analysis indicated that the main targets of IRN in treating stroke are EGFR, mTOR, JAK2, AKT, and JUN. Enrichment analysis revealed that IRN is associated with neurotransmitter receptor function and participates in the EGFR signaling pathway. Molecular docking results showed that it has a particularly strong binding affinity for AKT1 (binding energy ≈ -8.7 kcal/mol). The in vitro experiments showed that IRN treatment significantly alleviated the damage induced by OGD/R. Specifically, the levels of IL-1β and ROS decreased, the level of IL-10 increased, and the apoptosis rate decreased. Western blot results showed that, compared with the OGD/R group, IRN significantly upregulated the expression of p-EGFR and p-AKT. We demonstrated that IRN employs a multi-target approach to counteract stroke pathology, as revealed by computational predictions and experimental validation.

Discussion: The convergence of network pharmacology, molecular docking, and in vitro assays enabled the identification of key targets, including EGFR, AKT1, and JAK2. These methods also indicate that IRN can simultaneously regulate the inflammatory, oxidative stress, and apoptotic processes. Compared to singletarget agents, IRN exhibits superior multi-target therapeutic potential. These findings, derived from database analyses and cell-based assays, provide a comprehensive overview of IRN's pharmacological effects, which are consistent with its known neuroprotective benefits. Although these results are obtained from cell-based models and predictive databases, they provide a cohesive mechanistic rationale that is consistent with the neuroprotective properties ascribed to IRN. Further studies in animal models and in clinical settings must be conducted to apply these insights for therapeutic purposes.

Conclusion: IRN can exert neuroprotective effects against stroke by regulating key targets, including EGFR. It exhibits anti-inflammatory, anti-oxidative, and anti-apoptotic activities, which provide a reasonable basis for developing IRN as a drug for treating stroke.

基于网络药理学和分子对接技术探索异蛇碱在脑卒中中的作用机制。
简介:本研究旨在阐明异羟基磷灰石(IRN)在脑卒中中的神经保护机制。方法:采用网络药理学方法,利用SwissTargetPrediction、HERB、TCMIP 2.0数据库预测IRN的作用靶点。我们确定了IRN和中风共有的65个靶点。我们使用R软件进行GO和KEGG富集分析,并构建了一个复合靶标-途径-疾病网络。此外,我们还进行了分子对接实验来研究IRN与其主要靶点之间的结合相互作用。随后,利用人神经母细胞瘤细胞系SH-SY5Y在低氧条件下(1% O2)建立氧-葡萄糖剥夺/再氧化(OGD/R)模型。CCK-8法测定细胞活力,确定IRN的有效工作浓度。然后采用ELISA法检测炎症因子IL-1β和IL-10的表达。采用双荧光法测定活性氧(ROS)活性。TUNEL染色检测细胞凋亡情况。最后,采用Western blot检测IRN对细胞中EGFR和AKT表达的影响。结果:网络药理学分析结果显示,IRN治疗脑卒中的主要靶点为EGFR、mTOR、JAK2、AKT和jun,富集分析显示,IRN与神经递质受体功能相关,参与EGFR信号通路。分子对接结果表明,它对AKT1具有特别强的结合亲和力(结合能≈-8.7 kcal/mol)。体外实验表明,IRN处理显著减轻了OGD/R引起的损伤。其中IL-1β、ROS水平降低,IL-10水平升高,细胞凋亡率降低。Western blot结果显示,与OGD/R组相比,IRN显著上调了p-EGFR和p-AKT的表达。通过计算预测和实验验证,我们证明了IRN采用多靶点方法来对抗中风病理。讨论:网络药理学、分子对接和体外检测的融合使关键靶点的鉴定成为可能,包括EGFR、AKT1和JAK2。这些方法还表明,IRN可以同时调节炎症、氧化应激和凋亡过程。与单靶点药物相比,IRN具有更好的多靶点治疗潜力。这些发现来自数据库分析和基于细胞的分析,提供了IRN药理学作用的全面概述,这与已知的神经保护作用一致。尽管这些结果是从基于细胞的模型和预测数据库中获得的,但它们提供了一个与IRN的神经保护特性一致的有凝聚力的机制原理。必须在动物模型和临床环境中进行进一步的研究,以将这些见解应用于治疗目的。结论:IRN可通过调节EGFR等关键靶点发挥脑卒中的神经保护作用。其具有抗炎、抗氧化、抗凋亡等活性,为开发脑卒中治疗药物提供了合理依据。
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来源期刊
CiteScore
3.10
自引率
5.60%
发文量
327
审稿时长
7.5 months
期刊介绍: Combinatorial Chemistry & High Throughput Screening (CCHTS) publishes full length original research articles and reviews/mini-reviews dealing with various topics related to chemical biology (High Throughput Screening, Combinatorial Chemistry, Chemoinformatics, Laboratory Automation and Compound management) in advancing drug discovery research. Original research articles and reviews in the following areas are of special interest to the readers of this journal: Target identification and validation Assay design, development, miniaturization and comparison High throughput/high content/in silico screening and associated technologies Label-free detection technologies and applications Stem cell technologies Biomarkers ADMET/PK/PD methodologies and screening Probe discovery and development, hit to lead optimization Combinatorial chemistry (e.g. small molecules, peptide, nucleic acid or phage display libraries) Chemical library design and chemical diversity Chemo/bio-informatics, data mining Compound management Pharmacognosy Natural Products Research (Chemistry, Biology and Pharmacology of Natural Products) Natural Product Analytical Studies Bipharmaceutical studies of Natural products Drug repurposing Data management and statistical analysis Laboratory automation, robotics, microfluidics, signal detection technologies Current & Future Institutional Research Profile Technology transfer, legal and licensing issues Patents.
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