Genomic and Functional Characterization of Sunflower Endophytes Reveals Mechanisms of Drought Tolerance and Growth Promotion.

IF 2.8 3区 生物学 Q2 PLANT SCIENCES
Plant Direct Pub Date : 2026-07-15 eCollection Date: 2026-07-01 DOI:10.1002/pld3.70184
Muritala Muhammed, Ayansina Segun Ayangbenro, Olubukola Oluranti Babalola
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Abstract

Drought severely limits sunflower (Helianthus annuus L.) productivity, necessitating sustainable microbial strategies to enhance plant resilience. Endophytic bacteria modulate plant stress responses through diverse plant growth-promoting (PGP) traits. This study characterized Pseudomonas protegens M4 and Citrobacter braakii M34 and evaluated their individual and combined effects on sunflower drought tolerance. Greenhouse experiments assessed inoculation with M4, M34, and their consortium (M4 + M34) under optimal (100% field capacity, FC) and drought conditions (75%-25% FC). Initial taxonomic identification based on 16S rRNA gene sequencing was further refined using whole-genome sequencing (WGS) for high-resolution classification and functional analysis. Genomic annotation and antiSMASH analysis revealed key PGP pathways in both strains, including enzymes involved in ethylene regulation, phosphate solubilization, biosynthesis of auxin-like compounds, osmoprotectant production, and reactive oxygen species detoxification, alongside shared and strain-specific secondary metabolite gene clusters. Under drought conditions, M4 primarily enhanced growth-related traits such as shoot development and leaf area, whereas M34 was associated with physiological stress tolerance indicators. The consortium M4 + M34 exhibited synergistic effects, significantly increasing the chlorophyll content, relative water content, and proline accumulation while reducing electrolyte leakage. Principal component analysis further confirmed the consortium's superior performance. These findings highlight the potential of genomically and functionally characterized endophytic bacterial consortia as effective bioinoculant strategies for improving sunflower productivity under water-limited conditions.

向日葵内生植物的基因组和功能特征揭示了耐旱和促生长的机制。
干旱严重限制了向日葵(Helianthus annuus L.)的生产力,需要可持续的微生物策略来增强植物的抵御能力。内生细菌通过多种植物促生长(PGP)特性调节植物的胁迫反应。研究了假单胞菌M4和布拉基柠檬酸杆菌M34对向日葵抗旱性的影响。温室试验评估了M4、M34及其组合(M4 + M34)在最优(100%田间容量,FC)和干旱(75% ~ 25% FC)条件下的接种效果。基于16S rRNA基因测序的初步分类鉴定进一步利用全基因组测序(WGS)进行高分辨率分类和功能分析。基因组注释和抗smash分析揭示了这两种菌株的关键PGP途径,包括参与乙烯调节、磷酸盐增溶、生长素类化合物的生物合成、渗透保护剂生产和活性氧解毒的酶,以及共享和菌株特异性的次级代谢物基因簇。在干旱条件下,M4主要提高了茎部发育和叶面积等生长相关性状,而M34主要提高了生理抗逆性指标。联合体M4 + M34表现出协同效应,显著增加叶绿素含量、相对含水量和脯氨酸积累,同时减少电解质泄漏。主成分分析进一步证实了该联合体的优越性能。这些发现强调了内生细菌联合体的基因组和功能特征作为有效的生物接种策略在水限制条件下提高向日葵生产力的潜力。
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来源期刊
Plant Direct
Plant Direct Environmental Science-Ecology
CiteScore
5.00
自引率
3.30%
发文量
101
审稿时长
14 weeks
期刊介绍: Plant Direct is a monthly, sound science journal for the plant sciences that gives prompt and equal consideration to papers reporting work dealing with a variety of subjects. Topics include but are not limited to genetics, biochemistry, development, cell biology, biotic stress, abiotic stress, genomics, phenomics, bioinformatics, physiology, molecular biology, and evolution. A collaborative journal launched by the American Society of Plant Biologists, the Society for Experimental Biology and Wiley, Plant Direct publishes papers submitted directly to the journal as well as those referred from a select group of the societies’ journals.
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