Four novel Pseudoalteromonas species isolated from seawater: Pseudoalteromonas mucoides sp. nov., Pseudoalteromonas aquimarina sp. nov., Pseudoalteromonas maris sp. nov. and Pseudoalteromonas thalassia sp. nov.

IF 2.3 3区 生物学 Q4 MICROBIOLOGY
Inhyup Kim, Sunho Park, Chunghwan Baek, Seunghui Kwak, Haejin Woo, Hyunji Lee, Subin Yook, Jisu Kim, Taegun Seo
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引用次数: 0

Abstract

Four novel marine bacteria, ZZD1T, SSM20T, SSDWG2T and SSMSWG5T, were collected from seawater at Jajakdo and Minmeoru Beaches, Republic of Korea. The cells of these strains were Gram-stain-negative and rod-shaped. Strains ZZD1T, SSM20T, SSDWG2T and SSMSWG5T had the highest 16S rRNA gene sequence similarity to Pseudoalteromonas carrageenovora IAM 12662T (16S rRNA gene sequence similarity, 99.1%), Pseudoalteromonas spongiae UST010723-006T (99.2%), Pseudoalteromonas caenipelagi JBTF-M23T (98.4%) and Pseudoalteromonas shioyasakiensis SE3T (99.2%), respectively. Polyphasic and phylogenetic analyses confirmed that the four strains were closely related to the genus Pseudoalteromonas. The digital DNA-DNA hybridization values ranged from 18.9 to 22.2% for ZZD1T, 19.1 to 26.0% for SSM20T, 19.7 to 22.8% for SSDWG2T and 19.7 to 34.5% for SSMSWG5T. All values were thus below the 70% threshold, indicating distinct genomic differences between the strains. In addition, the average nucleotide identity and average amino acid identity of ZZD1T, SSM20T, SSDWG2T and SSMSWG5T with other species of the genus Pseudoalteromonas included in the phylogenetic analysis were 66.6-93.1% and 70.4-88.2%, respectively. Collectively, these results confirmed that the four strains represented new species within the genus Pseudoalteromonas. Based on these findings, the strains were classified as Pseudoalteromonas mucoides sp. nov. (type strain ZZD1T=KACC 23717T=TBRC 19020T), Pseudoalteromonas aquimarina sp. nov. (type strain SSM20T=KACC 23718T=TBRC 19019T), Pseudoalteromonas maris sp. nov. (type strain SSDWG2T=KACC 23719T=TBRC 19021T) and Pseudoalteromonas thalassia sp. nov. (type strain SSMSWG5T=KACC 23734T=TBRC 19022T).

从海水中分离到的4个新假异单胞菌:粘液假异单胞菌、海水假异单胞菌、海洋假异单胞菌和海洋假异单胞菌。
从韩国jakizdo和Minmeoru海滩的海水中采集了4种新型海洋细菌ZZD1T、SSM20T、SSDWG2T和SSMSWG5T。这些菌株的细胞革兰氏染色阴性,呈棒状。菌株ZZD1T、SSM20T、SSDWG2T和SSMSWG5T与carrageenovora Pseudoalteromonas IAM 12662T (16S rRNA基因序列相似性为99.1%)、spongiae Pseudoalteromonas UST010723-006T(99.2%)、caenpiagi Pseudoalteromonas JBTF-M23T(98.4%)和shiyasakipseudoalteromonas SE3T(99.2%)的16S rRNA基因序列相似性最高。多相分析和系统发育分析证实这4株菌株与假互生单胞菌属亲缘关系密切。ZZD1T的数字DNA-DNA杂交值为18.9 ~ 22.2%,SSM20T为19.1 ~ 26.0%,SSDWG2T为19.7 ~ 22.8%,SSMSWG5T为19.7 ~ 34.5%。因此,所有值都低于70%的阈值,表明菌株之间存在明显的基因组差异。此外,ZZD1T、SSM20T、SSDWG2T和SSMSWG5T与假互单胞菌属其他物种的核苷酸和氨基酸的平均同源性分别为66.6-93.1%和70.4-88.2%。总之,这些结果证实了这4株菌株代表了假互交单胞菌属的新种。根据这些结果,将菌株分类为11月粘液假互单胞菌(型菌株ZZD1T=KACC 23717T=TBRC 19020T)、11月水草假互单胞菌(型菌株SSM20T=KACC 23718T=TBRC 19019T)、11月海洋假互单胞菌(型菌株SSDWG2T=KACC 23719T=TBRC 19021T)和11月海洋假互单胞菌(型菌株SSMSWG5T=KACC 23734T=TBRC 19022T)。
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来源期刊
CiteScore
5.20
自引率
21.40%
发文量
426
审稿时长
1 months
期刊介绍: Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names. The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including: Identification, characterisation and culture preservation Microbial evolution and biodiversity Molecular environmental work with strong taxonomic or evolutionary content Nomenclature Taxonomy and phylogenetics.
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