Evaluation of a portable multiplex real-time pcr assay for the detection of monkeypox virus and non-variola orthopoxviruses.

IF 4 3区 医学 Q2 VIROLOGY
Shanshan Li, Nabojeet Das, Natalie Miller, Ariel Caudle, Kimberly Wilkins, Theodora Khan, Stefan Pfotenhauer, Amy Saunders, Christina L Hutson, Kodumudi S Venkateswaran, William M Nelson, Neeraja Venkateswaran, Panayampalli S Satheshkumar, Michael B Townsend
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引用次数: 0

Abstract

Monkeypox (mpox) is the most significant orthopoxvirus (OPXV) infection in humans since smallpox eradication. The World Health Organization (WHO) has twice declared public health emergency of international concern due to the expansive spread of clade I and II mpox cases, thus prompting public health scientists to develop rapid and effective diagnostic tools. Clinical presentations of monkeypox can overlap with other vesiculopustular diseases, particularly those caused by Varicella-Zoster virus (VZV), complicating accurate diagnosis in decentralized or resource-limited settings. In this study, we performed an in-lab evaluation of a multiplexed real-time PCR on a portable platform (T-COR 8) for the detection of monkeypox virus (MPXV) and non-variola orthopoxvirus (NVAR-OPXV), and differentiation from varicella-zoster virus (VZV). The T-COR 8 platform required minimal technical skill, limited hands-on time, and generated results for 8 samples within 1 h using crude specimens, without the need for nucleic acid extraction. The performance characteristics were investigated using MPXV and VZV clinical sample remainders and a panel of laboratory cultured viruses. Testing of 116 clinical remainder specimens in the MPXV/NVAR-OPXV assay yielded 100% sensitivity, 97.8% specificity, and 99.1% agreement with prior test results. The MPXV/NVAR-OPXV/VZV assay detected and correctly differentiated MPXV and VZV in a limited set of clinical samples (n = 39). The MPXV assay demonstrates specificity for MPXV, except for Akhmeta virus (AKMV), out of the 20 different species/isolates tested, including 15 orthopoxviruses and 4 non-orthopoxviruses, and VZV. These findings support the T-COR 8 platform as a rapid, accurate, and field-deployable diagnostic tool suitable for expanding monkeypox testing capacity.

用于检测猴痘病毒和非天花正痘病毒的便携式多重实时pcr方法的评价。
猴痘是天花根除以来最严重的人类正痘病毒感染。世界卫生组织(世卫组织)两次宣布,由于I和II支mpox病例的广泛传播,这是国际关注的突发公共卫生事件,从而促使公共卫生科学家开发快速有效的诊断工具。猴痘的临床表现可与其他水痘-带状疱疹病毒(VZV)引起的水痘-带状疱疹疾病重叠,使分散或资源有限地区的准确诊断复杂化。在这项研究中,我们在便携式平台(T-COR 8)上对多重实时荧光定量PCR检测猴痘病毒(MPXV)和非天花正痘病毒(NVAR-OPXV)进行了实验室评估,并与水痘带状疱疹病毒(VZV)进行了分化。T-COR 8平台需要最少的技术技能,有限的动手时间,使用粗标本在1小时内生成8个样品的结果,无需核酸提取。使用MPXV和VZV临床样本残余物和实验室培养的一组病毒来研究其性能特征。在116个临床剩余标本中,MPXV/NVAR-OPXV检测的灵敏度为100%,特异性为97.8%,与先前测试结果的一致性为99.1%。MPXV/NVAR-OPXV/VZV试验在有限的临床样本(n = 39)中检测并正确区分MPXV和VZV。MPXV试验表明,除了Akhmeta病毒(AKMV)外,在测试的20种不同种/分离株中,MPXV具有特异性,包括15种正痘病毒和4种非正痘病毒,以及VZV。这些发现支持T-COR 8平台作为一种快速、准确和可现场部署的诊断工具,适用于扩大猴痘测试能力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Virology Journal
Virology Journal 医学-病毒学
CiteScore
7.40
自引率
2.10%
发文量
186
审稿时长
1 months
期刊介绍: Virology Journal is an open access, peer reviewed journal that considers articles on all aspects of virology, including research on the viruses of animals, plants and microbes. The journal welcomes basic research as well as pre-clinical and clinical studies of novel diagnostic tools, vaccines and anti-viral therapies. The Editorial policy of Virology Journal is to publish all research which is assessed by peer reviewers to be a coherent and sound addition to the scientific literature, and puts less emphasis on interest levels or perceived impact.
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