Simon Weinmüller, Deepak Charles Chellapandian, Jonathan Endres, Jochen Leupold, Florian Gritsch, Fabian Wagner, Rainer Schneider, Moritz Zaiss
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引用次数: 0
Abstract
Purpose: FLASH imaging is widely assumed to produce a T1-weighted steady-state contrast using RF- and gradient-spoiling. We observed substantial overestimation of CSF signals in simulations, when diffusion was neglected and realistic proton density was applied. This work investigates the role of diffusion in steady-state FLASH contrast formation and its implications for simulation-based modeling and measurement.
Methods: FLASH sequences were simulated using phase graph simulations using a synthetic brain phantom with and without diffusion and realistic PD values to show the contrast change. The impact of neglecting diffusion in synthetic training data was evaluated using a segmentation network trained on simulated data and tested on in vivo measurement. Experimental validation of the contrast change was performed using a 3D-printed brain phantom using silicone oil as a low-diffusivity compartment.
Results: Without diffusion, simulations showed CSF signal intensities higher than WM, resulting in a contrast change. Diffusion suppresses higher-order echoes in long T2 tissues and is essential for achieving the T1-weighted steady-state contrast. A NN trained without diffusion fails to generalize to in vivo data and measurements with silicone oil compartments confirm the contrast changes in low-diffusivity media.
Conclusion: Diffusion is essential for realistic FLASH simulations of long T2 tissues such as CSF. Steady-state FLASH contrast arises from the interplay of RF-, gradient-spoiling, and "multi-TR-relaxation-spoiling" governed by T2-decay and diffusion effects. For many quadratic phase cycling schemes, diffusion is required to obtain realistic T1-weighted contrast in MR simulations and should not be neglected in simulations or simulation-based deep learning applications.
期刊介绍:
Magnetic Resonance in Medicine (Magn Reson Med) is an international journal devoted to the publication of original investigations concerned with all aspects of the development and use of nuclear magnetic resonance and electron paramagnetic resonance techniques for medical applications. Reports of original investigations in the areas of mathematics, computing, engineering, physics, biophysics, chemistry, biochemistry, and physiology directly relevant to magnetic resonance will be accepted, as well as methodology-oriented clinical studies.