Efficiency of Bradford‐Reactive Protein Extraction From Agriculture Soil in Relation to Soil Parameters

IF 4.3 2区 农林科学 Q2 SOIL SCIENCE
Vojtěch Štulc, Vítězslav Vlček, Gabriela Franke, Petr Kalousek
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Abstract

The aim of the study was to investigate the hypothesis that by altering extraction time, temperature in the autoclave, and type of extractant during extraction, the maximum possible Bradford‐reactive soil protein yield could be significantly increased, and to determine the effect of so‐called color correction in such altered conditions. Another objective was to review the relation between the alternative protein pools and selected quantitative soil parameters, such as the content of soil organic carbon or total soil nitrogen. Bradford‐reactive soil protein is operationally defined by the Bradford assay to measure its concentration in a water solution, extracted under specific conditions such as high temperature in an autoclave and high ionic strength of the extractant solution. The study examined the possibility of maximum extractability by altering the temperature and the type of extractant and the relation to the color correction. We also tried to test the hypothesis whether the loads of repeated cycles could be minimized by color correction, but without prove at tested 9 cycles of extraction. The results showed that the proposed one cycle method with pyrophosphate solution and 135°C extracted 2–3 times the protein extracted by one cycle of autoclaving under the conventional condition of 121°C with a 0.05‐M sodium citrate solution. Unlike other conditions, the values from the proposed one cycle method significantly correlated with soil organic carbon content ( p < 0.05, r 2 = 0.9) and while a statistically significant correlation with the content of water stable aggregates with p < 0.05 was not found, the values of the correlation coefficient were regularly higher in combination of higher temperatures (121°C–135°C) with the strongest type of extractant (0.1‐M sodium pyrophosphate) than the rest of the combinations. The color correction factor changed the measured value of Bradford‐reactive soil protein from the proposed maximal yield variant by 11%–13% in comparison to 14%–17% under one cycle conventional condition. These findings support the possibility of reducing the number of extraction cycles in the autoclave to lower units and thus increasing practicality and efficiency of measurement. On the other hand, it may be still recommended to include color correction during measurement protocol, especially in case of datasets with substantially different soil type for example, grassland versus arable land, cambisol versus chernozem, since the influence of color correction on measured Bradford‐reactive soil protein between soils greatly differs.
从农业土壤中提取Bradford反应蛋白的效率与土壤参数的关系
本研究的目的是研究这样一种假设,即通过改变提取时间、高压灭菌器的温度和提取剂的类型,可以显著提高布拉德福德反应土壤蛋白的最大产量,并确定在这种改变的条件下所谓的颜色校正的效果。另一个目的是回顾替代蛋白质库与土壤定量参数(如土壤有机碳含量或土壤全氮含量)之间的关系。布拉德福德反应性土壤蛋白是由布拉德福德测定法定义的,用于测量其在水溶液中的浓度,在特定条件下(如高压灭菌器中的高温和萃取剂溶液的高离子强度)提取。本研究考察了通过改变萃取剂的温度和种类以及与颜色校正的关系来获得最大萃取率的可能性。我们也试图验证假设是否可以通过颜色校正来最小化重复循环的负荷,但没有在测试的9个提取周期中证明。结果表明,采用焦磷酸盐溶液和135℃一循环法提取的蛋白质是常规条件下121℃和0.05 μ M柠檬酸钠溶液一循环法提取的蛋白质的2-3倍。与其他条件不同,单循环方法的值与土壤有机碳含量显著相关(p < 0.05, r 2 = 0.9),而与水稳定团聚体含量的统计学显著相关(p < 0.05)未被发现,在较高温度(121°C - 135°C)和最强类型的萃取剂(0.1‐M焦磷酸钠)的组合中,相关系数值比其他组合有规律地更高。与单周期常规条件下的14%-17%相比,颜色校正因子使布拉德福德反应土壤蛋白的测量值从提议的最大产量变量中改变了11%-13%。这些发现支持了在高压灭菌器中减少提取循环次数以降低单位的可能性,从而提高了测量的实用性和效率。另一方面,可能仍然建议在测量方案中包括颜色校正,特别是在具有明显不同土壤类型的数据集的情况下,例如,草地与耕地,cambisol与黑钙土,因为颜色校正对土壤之间测量的Bradford反应性土壤蛋白的影响有很大差异。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
European Journal of Soil Science
European Journal of Soil Science 农林科学-土壤科学
CiteScore
8.20
自引率
4.80%
发文量
117
审稿时长
5 months
期刊介绍: The EJSS is an international journal that publishes outstanding papers in soil science that advance the theoretical and mechanistic understanding of physical, chemical and biological processes and their interactions in soils acting from molecular to continental scales in natural and managed environments.
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