Stochastic optimization of Gradient Boosting Decision Trees for interpretable prediction of heavy metal adsorption onto biochar

IF 6.7 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Current Research in Biotechnology Pub Date : 2026-01-01 Epub Date: 2026-05-27 DOI:10.1016/j.crbiot.2026.100393
Mahran Al-Zyoud , Salama A. Mostafa , Ibrahim Khersan , J. Gowrishankar , Prabhat Kumar Sahu , Siya Singla , Sardor Sabirov , Islom. Khudayberganov , Samim Sherzod
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引用次数: 0

Abstract

Predicting the heavy metal adsorption capacity of biochar is a significant challenge due to complex physicochemical mechanisms and the limitations of traditional experimental approaches. This study aimed to develop and validate a robust, interpretable machine learning framework by optimizing Gradient Boosting Decision Trees (GBDT) for this predictive task. Using a comprehensive dataset of 359 experimental points, we compared four hyperparameter optimization heuristics and found that Gaussian Process Optimization (GPO) yielded a model with superior generalization performance. The final GBDT-GPO model achieved a coefficient of determination (R2) of 0.9784 and a mean squared error (MSE) of 0.0035 on an unseen test set, in contrast to other methods like Evolution Strategies, which showed significant overfitting. Furthermore, Shapley Additive Explanations (SHAP) analysis identified initial metal concentration and solution pH as the dominant factors governing adsorption, outweighing physical properties like surface area. This research establishes a highly accurate and interpretable computational strategy that can guide the rational design of biochar and optimize its application in water treatment.

Abstract Image

生物炭吸附重金属可解释预测的梯度增强决策树随机优化
由于生物炭吸附重金属的物理化学机制复杂且传统实验方法的局限性,预测生物炭吸附重金属的能力是一项重大挑战。本研究旨在通过优化梯度增强决策树(GBDT)来开发和验证一个强大的、可解释的机器学习框架。利用359个实验点的综合数据集,我们比较了四种超参数优化启发式方法,发现高斯过程优化(GPO)产生的模型具有更好的泛化性能。最终的GBDT-GPO模型在未知测试集上的决定系数(R2)为0.9784,均方误差(MSE)为0.0035,而其他方法如Evolution Strategies则显示出明显的过拟合。此外,Shapley添加剂解释(SHAP)分析发现,初始金属浓度和溶液pH是影响吸附的主要因素,而不是物理性质,如表面积。本研究建立了一个高度精确和可解释的计算策略,可以指导生物炭的合理设计和优化其在水处理中的应用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Current Research in Biotechnology
Current Research in Biotechnology Biochemistry, Genetics and Molecular Biology-Biotechnology
CiteScore
6.70
自引率
3.60%
发文量
50
审稿时长
38 days
期刊介绍: Current Research in Biotechnology (CRBIOT) is a new primary research, gold open access journal from Elsevier. CRBIOT publishes original papers, reviews, and short communications (including viewpoints and perspectives) resulting from research in biotechnology and biotech-associated disciplines. Current Research in Biotechnology is a peer-reviewed gold open access (OA) journal and upon acceptance all articles are permanently and freely available. It is a companion to the highly regarded review journal Current Opinion in Biotechnology (2018 CiteScore 8.450) and is part of the Current Opinion and Research (CO+RE) suite of journals. All CO+RE journals leverage the Current Opinion legacy-of editorial excellence, high-impact, and global reach-to ensure they are a widely read resource that is integral to scientists' workflow.
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