{"title":"Inferring the Chemotaxis Distortion Function From Cellular Decision Strategies","authors":"Fardad Vakilipoor;Johannes Konrad;Maximilian Schäfer","doi":"10.1109/TMBMC.2026.3692999","DOIUrl":null,"url":null,"abstract":"Cellular intelligence allows cells to process environmental signals and make context-dependent decisions. This is clearly seen in chemotaxis, where cells navigate chemical gradients despite noisy signaling pathways. To investigate how cells deal with uncertainty, an information-theoretic framework based on rate-distortion theory (RDT) is applied. The Blahut-Arimoto algorithm (BAA) computes optimal decision strategies that minimize mutual information while satisfying distortion constraints, balancing sensing accuracy with distortion constraint equivalent to resource cost. The inverse Blahut-Arimoto algorithm (IBAA) is proposed to compute the distortion function, which quantifies the system’s decision-making criteria for realizing a decision strategy to map input signals to outputs. This general framework extends beyond chemotaxis to biological and engineered systems requiring efficient information processing under uncertainty. The proposed IBAA is validated by estimating theoretical distortion functions in a binary decision scenario, which is similar to apoptosis. Additionally, using the local excitation global inhibition (LEGI) model to simulate chemotactic responses, the distortion function from the cell’s perspective is computed. The finding reveals that the decision criterion, i.e., the distortion function, of the cell in chemotaxis processes is fixed regardless of the cell’s state. This observation is analogous to any system view where the decision criterion is fixed while the optimal decision strategy can vary based on the environmental conditions.","PeriodicalId":36530,"journal":{"name":"IEEE Transactions on Molecular, Biological, and Multi-Scale Communications","volume":"12 ","pages":"599-614"},"PeriodicalIF":2.5000,"publicationDate":"2026-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"IEEE Transactions on Molecular, Biological, and Multi-Scale Communications","FirstCategoryId":"1085","ListUrlMain":"https://ieeexplore.ieee.org/document/11517555/","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2026/3/13 0:00:00","PubModel":"Epub","JCR":"Q2","JCRName":"ENGINEERING, ELECTRICAL & ELECTRONIC","Score":null,"Total":0}
引用次数: 0
Abstract
Cellular intelligence allows cells to process environmental signals and make context-dependent decisions. This is clearly seen in chemotaxis, where cells navigate chemical gradients despite noisy signaling pathways. To investigate how cells deal with uncertainty, an information-theoretic framework based on rate-distortion theory (RDT) is applied. The Blahut-Arimoto algorithm (BAA) computes optimal decision strategies that minimize mutual information while satisfying distortion constraints, balancing sensing accuracy with distortion constraint equivalent to resource cost. The inverse Blahut-Arimoto algorithm (IBAA) is proposed to compute the distortion function, which quantifies the system’s decision-making criteria for realizing a decision strategy to map input signals to outputs. This general framework extends beyond chemotaxis to biological and engineered systems requiring efficient information processing under uncertainty. The proposed IBAA is validated by estimating theoretical distortion functions in a binary decision scenario, which is similar to apoptosis. Additionally, using the local excitation global inhibition (LEGI) model to simulate chemotactic responses, the distortion function from the cell’s perspective is computed. The finding reveals that the decision criterion, i.e., the distortion function, of the cell in chemotaxis processes is fixed regardless of the cell’s state. This observation is analogous to any system view where the decision criterion is fixed while the optimal decision strategy can vary based on the environmental conditions.
期刊介绍:
As a result of recent advances in MEMS/NEMS and systems biology, as well as the emergence of synthetic bacteria and lab/process-on-a-chip techniques, it is now possible to design chemical “circuits”, custom organisms, micro/nanoscale swarms of devices, and a host of other new systems. This success opens up a new frontier for interdisciplinary communications techniques using chemistry, biology, and other principles that have not been considered in the communications literature. The IEEE Transactions on Molecular, Biological, and Multi-Scale Communications (T-MBMSC) is devoted to the principles, design, and analysis of communication systems that use physics beyond classical electromagnetism. This includes molecular, quantum, and other physical, chemical and biological techniques; as well as new communication techniques at small scales or across multiple scales (e.g., nano to micro to macro; note that strictly nanoscale systems, 1-100 nm, are outside the scope of this journal). Original research articles on one or more of the following topics are within scope: mathematical modeling, information/communication and network theoretic analysis, standardization and industrial applications, and analytical or experimental studies on communication processes or networks in biology. Contributions on related topics may also be considered for publication. Contributions from researchers outside the IEEE’s typical audience are encouraged.