Multiscale stochastic modeling for calcium dynamics in cardiac electrophysiology: assessing whole-cell model reliability under phosphorylation and LCC downregulation.

IF 3
Frontiers in network physiology Pub Date : 2026-04-13 eCollection Date: 2026-01-01 DOI:10.3389/fnetp.2026.1727426
Gustavo Montes Novaes, Rodrigo Weber Dos Santos, Sergio Alonso, Enrique Alvarez-Lacalle
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引用次数: 0

Abstract

Intracellular calcium (Ca2+) dynamics drives contractile function in cardiac myocytes. In particular, L-type Calcium Channels (LCCs) and Ryanodine Receptors (RyRs) are organized in microdomains, where LCCs trigger substantial Ca2+ release from the Sarcoplasmic Reticulum (SR) via RyRs. Different microdomains can be coupled at different length scales by calcium diffusion or common external activation. We present a Scalable Aggregate Calcium Release Unit (SA-CaRU) model for human ventricular myocytes that integrates a recently developed Markov Chain (MC)-based description of LCCs, replacing classical Hodgkin-Huxley gates. Our approach is based on previously published MC-based frameworks for the human heart, enabling stochastic gating and reproducing evoked local Ca2+ release statistics across different effective levels of microdomain aggregation. Our single-SA-CaRU system captures, within a unified framework, key features of microscale and macroscale Ca2+ cycling and allows, for the first time, systematic exploration of variability in SR Ca2+ release as a function of effective microdomain size and coupling. Simulations with increasing numbers of channels reveal that the transition from stochastic to deterministic-like Ca2+ behavior is typically sharp at a specific cluster size. Under normal (healthy) conditions, this occurs at O ( 1 0 2 ) LCCs (with mild sensitivity to the RyR:LCC scaling). However, under high phosphorylation or LCC upregulation, stochasticity persists and convergence to deterministic-like behavior is absent or markedly delayed even for total LCC numbers as large as 20,000. In these conditions, whole-cell deterministic models become doubtful, since their behavior can be qualitatively different from that arising from any plausibly mediated coordination of subcellular calcium release units.

心脏电生理中钙动力学的多尺度随机建模:评估磷酸化和LCC下调下全细胞模型的可靠性。
细胞内钙(Ca2+)动力学驱动心肌细胞收缩功能。特别是,l型钙通道(lcc)和Ryanodine受体(RyRs)被组织在微域中,lcc通过RyRs触发大量Ca2+从肌浆网(SR)释放。不同的微畴可以通过钙扩散或共同的外部激活在不同的长度尺度上偶联。我们提出了一个可扩展的聚集体钙释放单元(SA-CaRU)模型,用于人心室肌细胞,该模型集成了最近开发的基于马尔可夫链(MC)的lcc描述,取代了经典的霍奇金-赫胥利门。我们的方法是基于先前发表的基于mc的人类心脏框架,实现随机门控,并在不同有效水平的微域聚集中重现诱发的局部Ca2+释放统计数据。我们的单sa - caru系统在统一的框架内捕获了微尺度和宏观尺度Ca2+循环的关键特征,并首次允许系统地探索SR Ca2+释放的变异性,作为有效微域大小和耦合的函数。随着通道数量的增加,模拟表明从随机到确定性样Ca2+行为的转变在特定的簇大小下通常是尖锐的。在正常(健康)条件下,这种情况发生在0(1 0 2)个LCC(对RyR:LCC标度有轻微敏感性)。然而,在高磷酸化或LCC上调的情况下,即使LCC总数高达20,000,随机性仍然存在,趋同于确定性样行为也不存在或明显延迟。在这种情况下,全细胞确定性模型变得值得怀疑,因为它们的行为可能与任何可能介导的亚细胞钙释放单位协调所产生的行为在质量上不同。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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CiteScore
2.70
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