{"title":"Process-analytical study of IL-6 refolding during batch buffer exchange","authors":"Yuichi Nakahara, Yuta Endo, Yutaka Matsuda, Shunsuke Yamazaki, Mayumi Watanabe, Yutaka Sato, Masayo Date, Naoyuki Yamada, Yoshiyuki Takahara, Kazutoshi Takahashi, Keisuke Kato, Takahiro Okasora, Daisuke Ejima","doi":"10.1007/s00249-026-01845-4","DOIUrl":null,"url":null,"abstract":"<div>\n \n <p>Interleukin-6 (IL-6) is an aggregation-prone cytokine whose recombinant production from Escherichia coli inclusion bodies remains challenging because of inefficient refolding. Here, we present a limited batch-mode process-analytical study comparing two practical buffer-exchange operations, “fast” and “slow”, during batch dilution refolding of IL-6. Using SDS-PAGE, size-exclusion chromatography (SEC), dynamic light scattering (DLS), and far-UV circular dichroism (CD) spectroscopy, we examined dimerization and aggregation under acidic and guanidine denaturation workflows. The data suggest that IL-6 forms predominantly non-covalent dimers and that batch buffer-exchange operation and timescale are associated with aggregation outcome. Because the acidic and guanidine workflows differed in starting solvent composition, residual denaturant, and final protein concentration, the results should be interpreted as comparisons of complete workflow conditions rather than isolated denaturant effects. Overall, the combined use of SEC, DLS, and far-UV CD provides a practical framework for monitoring IL-6 refolding outcomes, while mechanistic assignments remain beyond the scope of this study.</p>\n </div>","PeriodicalId":548,"journal":{"name":"European Biophysics Journal","volume":"55 4","pages":"689 - 695"},"PeriodicalIF":2.3000,"publicationDate":"2026-04-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"European Biophysics Journal","FirstCategoryId":"2","ListUrlMain":"https://link.springer.com/article/10.1007/s00249-026-01845-4","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOPHYSICS","Score":null,"Total":0}
引用次数: 0
Abstract
Interleukin-6 (IL-6) is an aggregation-prone cytokine whose recombinant production from Escherichia coli inclusion bodies remains challenging because of inefficient refolding. Here, we present a limited batch-mode process-analytical study comparing two practical buffer-exchange operations, “fast” and “slow”, during batch dilution refolding of IL-6. Using SDS-PAGE, size-exclusion chromatography (SEC), dynamic light scattering (DLS), and far-UV circular dichroism (CD) spectroscopy, we examined dimerization and aggregation under acidic and guanidine denaturation workflows. The data suggest that IL-6 forms predominantly non-covalent dimers and that batch buffer-exchange operation and timescale are associated with aggregation outcome. Because the acidic and guanidine workflows differed in starting solvent composition, residual denaturant, and final protein concentration, the results should be interpreted as comparisons of complete workflow conditions rather than isolated denaturant effects. Overall, the combined use of SEC, DLS, and far-UV CD provides a practical framework for monitoring IL-6 refolding outcomes, while mechanistic assignments remain beyond the scope of this study.
期刊介绍:
The journal publishes papers in the field of biophysics, which is defined as the study of biological phenomena by using physical methods and concepts. Original papers, reviews and Biophysics letters are published. The primary goal of this journal is to advance the understanding of biological structure and function by application of the principles of physical science, and by presenting the work in a biophysical context.
Papers employing a distinctively biophysical approach at all levels of biological organisation will be considered, as will both experimental and theoretical studies. The criteria for acceptance are scientific content, originality and relevance to biological systems of current interest and importance.
Principal areas of interest include:
- Structure and dynamics of biological macromolecules
- Membrane biophysics and ion channels
- Cell biophysics and organisation
- Macromolecular assemblies
- Biophysical methods and instrumentation
- Advanced microscopics
- System dynamics.