Decoding the diabetic transition: a lipidomic approach for biomarker discovery in an Indian cohort.

IF 2.4 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Sneha Singh, Rekha Nagpal, Ashutosh Kumar
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Abstract

Type 2 diabetes mellitus (T2DM) is a significant public health burden in India, where the disease presents with unique clinical characteristics, yet data from this high-risk population remain scarce. This study aimed to conduct a lipidomic analysis to identify candidate lipid species associated with different glycemic stages using a refined untargeted lipidomics approach. A cross-sectional study of 95 individuals from Mumbai was stratified into healthy, prediabetic, newly diagnosed diabetic, and advanced diabetic groups based on glycated hemoglobin levels. An untargeted ultra-high-performance liquid chromatography-tandem mass spectrometry approach was applied to pooled serum samples to construct a comprehensive lipid library and enable comparative profiling. A stringent filtering pipeline was implemented to ensure robust lipid identification. Our analysis identified a core lipidome of 69 species shared across all cohorts, alongside an increase in lipidomic diversity in diabetic states, with the advanced diabetic group exhibiting the highest number of unique species. Ceramides (Cer) were detected across the glycemic spectrum and exhibited a distinct remodeling pattern. Partial least squares discriminant analysis identified 20 candidate lipid species with variable importance in projection scores > 1.0, prominently including Cer, phosphatidylinositol, and hexosylceramides. Additional lipid classes of interest included sphingomyelins, triacylglycerols, acylcarnitines, and fatty acids. These hypothesis-generating findings provide a prioritized framework for future large-scale quantitative validation studies aimed at early prediction and risk stratification of T2DM in the Indian population.

解码糖尿病转变:在印度队列中发现生物标志物的脂质组学方法。
2型糖尿病(T2DM)在印度是一个重大的公共卫生负担,该疾病具有独特的临床特征,但来自这一高危人群的数据仍然很少。本研究旨在进行脂质组学分析,利用改进的非靶向脂质组学方法确定与不同血糖阶段相关的候选脂质种类。根据糖化血红蛋白(HbA1c)水平,对孟买95名患者进行了横断面研究,分为健康、糖尿病前期、新诊断的糖尿病和晚期糖尿病组。采用非靶向超高效液相色谱-串联质谱(UHPLC-MS/MS)方法对血清样本进行合并,建立全面的脂质文库,并进行比较分析。一个严格的过滤管道实施,以确保稳健的脂质鉴定。我们的分析确定了69种核心脂质组在所有队列中共享,同时糖尿病状态的脂质组多样性增加,晚期糖尿病组显示出最多的独特物种。神经酰胺(Cer)在血糖谱中被检测到,并表现出明显的重塑模式。偏最小二乘判别分析(PLS-DA)确定了20种候选脂质,它们在投影(VIP)评分中具有可变重要性(> 1.0),主要包括Cer、磷脂酰肌醇(PI)和己糖神经酰胺(HexCer)。其他感兴趣的脂类包括鞘磷脂(SM)、三酰基甘油(TG)、酰基肉碱(ACar)和脂肪酸(FA)。这些产生假设的发现为未来大规模定量验证研究提供了一个优先框架,旨在早期预测和印度人群中2型糖尿病的风险分层。
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来源期刊
Molecular omics
Molecular omics Biochemistry, Genetics and Molecular Biology-Biochemistry
CiteScore
5.40
自引率
3.40%
发文量
91
期刊介绍: Molecular Omics publishes high-quality research from across the -omics sciences. Topics include, but are not limited to: -omics studies to gain mechanistic insight into biological processes – for example, determining the mode of action of a drug or the basis of a particular phenotype, such as drought tolerance -omics studies for clinical applications with validation, such as finding biomarkers for diagnostics or potential new drug targets -omics studies looking at the sub-cellular make-up of cells – for example, the subcellular localisation of certain proteins or post-translational modifications or new imaging techniques -studies presenting new methods and tools to support omics studies, including new spectroscopic/chromatographic techniques, chip-based/array technologies and new classification/data analysis techniques. New methods should be proven and demonstrate an advance in the field. Molecular Omics only accepts articles of high importance and interest that provide significant new insight into important chemical or biological problems. This could be fundamental research that significantly increases understanding or research that demonstrates clear functional benefits. Papers reporting new results that could be routinely predicted, do not show a significant improvement over known research, or are of interest only to the specialist in the area are not suitable for publication in Molecular Omics.
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