Functional Genes Encoding for Enzyme-associated Function in Bacillus paranthracis B1-S Strain Isolated from the Deep-sea environment of Andaman Sea

IF 2.8 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Abhay B. Fulke, Shreya Bhanushali, Eisha Patrikar, Nilkanth Sharma
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Abstract

The ecological distribution of Bacillus paranthracis, primarily reported in terrestrial and clinical settings, remains unexplored in extreme marine ecosystems. This study addresses the knowledge gap by reporting the first isolation of strain B1-S, from the deep-sea sediment at a depth of 3,581 m in the Andaman Sea. The strain demonstrated extracellular production of protease, lipase, and DNase with enzyme activity indices of 1.08, 1.25 and 1.07, respectively. Genome sequencing revealed a 6.39 Mbp genome with 35.92% G + C content, high completeness (99.92%), and contamination (4%). Annotation identified multiple genes encoding hydrolytic enzymes, including proteases, lipases, and DNases, as well as carboxylase and decarboxylase genes, corroborating the observed enzymatic activity. The absence of genes encoding amylase, phosphatase, cellulase, and pectinase matched the negative in vitro assay results. This alignment between genomic and phenotypic data supports the organism’s metabolic capabilities for survival in a nutrient-limited deep-sea habitat. The findings highlight B. paranthracis B1-S may have potential for enzyme-based industrial applications, thereby contributing to the growing field of marine bioprospecting and the blue economy, thereby expanding the knowledge of known ecological niche.

Graphical Abstract

The alt text for this image may have been generated using AI.
安达曼海深海环境副嗜血杆菌B1-S菌株酶相关功能基因编码
副嗜血杆菌的生态分布,主要报道在陆地和临床设置,仍未探索在极端海洋生态系统。本研究通过报道首次从安达曼海3,581 m深的深海沉积物中分离到菌株B1-S,解决了这一知识空白。该菌株胞外可产蛋白酶、脂肪酶和dna酶,酶活指数分别为1.08、1.25和1.07。测序结果显示,该基因组全长6.39 Mbp, G + C含量为35.92%,完整性高(99.92%),污染低(4%)。注释发现了多个编码水解酶的基因,包括蛋白酶、脂肪酶和dna酶,以及羧化酶和脱羧酶基因,证实了观察到的酶活性。编码淀粉酶、磷酸酶、纤维素酶和果胶酶的基因缺失与体外试验结果一致。基因组和表型数据之间的这种一致性支持了生物体在营养有限的深海栖息地中生存的代谢能力。研究结果表明,双歧杆菌B1-S可能具有酶基工业应用潜力,从而有助于海洋生物勘探和蓝色经济领域的发展,从而扩大对已知生态位的认识。此图像的所有文本可能是使用AI生成的。
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来源期刊
Marine Biotechnology
Marine Biotechnology 工程技术-海洋与淡水生物学
CiteScore
4.80
自引率
3.30%
发文量
95
审稿时长
2 months
期刊介绍: Marine Biotechnology welcomes high-quality research papers presenting novel data on the biotechnology of aquatic organisms. The journal publishes high quality papers in the areas of molecular biology, genomics, proteomics, cell biology, and biochemistry, and particularly encourages submissions of papers related to genome biology such as linkage mapping, large-scale gene discoveries, QTL analysis, physical mapping, and comparative and functional genome analysis. Papers on technological development and marine natural products should demonstrate innovation and novel applications.
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