Microfluidics-based cell recognition through optimizing suspended cell staining techniques and artificial intelligence.

IF 6.3 3区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Areen K Al-Bashir, Lamis R Bany Issa, Haneen Ababneh, Farah Alshami, Esra'a Al-Shawwa, Ala'a Al-Rashdan, Ruba E Khnouf
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引用次数: 0

Abstract

PURPOSE: Blood staining is necessary to differentiate between its various cells. It is typically performed on a microscopic slide that contains a blood film. However, in some applications, there is a need to stain blood in suspension. METHODS: Three techniques were optimized (Romanowsky stains, Hematoxylin stain, and our proposed modified Romanowsky stain) for cell staining before injection into a microfluidic device. Images of stained cells in the microfluidic device were captured under an optical microscope. The effectiveness of staining techniques in cell differentiation was evaluated using color-based k-means clustering. Then, four pre-trained models (Alexnet, VGG16, Resnet, and Densnet) were applied to extract features and classify RBCs, WBCs, and CTCs. RESULTS: Only images showing clear cell borders were retained. The models achieved high testing accuracy, reaching 100%, 98%, 98%, and 95.34%, respectively. CONCLUSIONS: This high accuracy was achieved without the use of fluorescence labeling or expensive materials, thereby preserving the cells alive. Based on these results, the proposed staining technique was the most effective in differentiating between WBCs, RBCs, and CTCs, where all WBCs and RBCs were classified correctly.

基于微流体的细胞识别,优化悬浮细胞染色技术和人工智能。
目的:血液染色是区分其不同细胞的必要条件。它通常在含有血膜的显微镜载玻片上进行。然而,在某些应用中,需要对悬浮液中的血液进行染色。方法:优化三种技术(罗曼诺夫斯基染色、苏木精染色和我们提出的改良罗曼诺夫斯基染色)用于细胞注射前的染色。在光学显微镜下捕获微流控装置中染色细胞的图像。使用基于颜色的k-均值聚类来评估染色技术在细胞分化中的有效性。然后,使用四个预训练模型(Alexnet、VGG16、Resnet和Densnet)提取特征并对红细胞、白细胞和ctc进行分类。结果:仅保留清晰细胞边界的图像。模型的测试准确率较高,分别达到100%、98%、98%和95.34%。结论:在不使用荧光标记或昂贵材料的情况下实现了高准确度,从而保持了细胞的存活。基于这些结果,所提出的染色技术在区分白细胞、红细胞和CTCs方面是最有效的,其中所有的白细胞和红细胞都被正确分类。
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来源期刊
Journal of Biological Engineering
Journal of Biological Engineering BIOCHEMICAL RESEARCH METHODS-BIOTECHNOLOGY & APPLIED MICROBIOLOGY
CiteScore
7.10
自引率
1.80%
发文量
32
审稿时长
17 weeks
期刊介绍: Biological engineering is an emerging discipline that encompasses engineering theory and practice connected to and derived from the science of biology, just as mechanical engineering and electrical engineering are rooted in physics and chemical engineering in chemistry. Topical areas include, but are not limited to: Synthetic biology and cellular design Biomolecular, cellular and tissue engineering Bioproduction and metabolic engineering Biosensors Ecological and environmental engineering Biological engineering education and the biodesign process As the official journal of the Institute of Biological Engineering, Journal of Biological Engineering provides a home for the continuum from biological information science, molecules and cells, product formation, wastes and remediation, and educational advances in curriculum content and pedagogy at the undergraduate and graduate-levels. Manuscripts should explore commonalities with other fields of application by providing some discussion of the broader context of the work and how it connects to other areas within the field.
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