Modular arithmetic as an alternative to model seasonal time-varying transmission rates: Influenza as a case study.

IF 2.6 4区 工程技术 Q1 Mathematics
Woldegebriel Assefa Woldegerima, Nickson Golooba
{"title":"Modular arithmetic as an alternative to model seasonal time-varying transmission rates: Influenza as a case study.","authors":"Woldegebriel Assefa Woldegerima, Nickson Golooba","doi":"10.3934/mbe.2026021","DOIUrl":null,"url":null,"abstract":"<p><p>Seasonal infectious diseases like influenza pose a recurrent challenge to public health. While compartmental models, such as the susceptible-infectious-recovered-susceptible (SIRS) framework, are standard tools, representing the time-varying transmission rate, $ \\beta(t) $, in an interpretable yet effective manner remains a key challenge. Existing established alternative methods for modeling seasonality use sinusoidal forcing functions, flexible splines, etc. In this paper, we propose and apply a modular approach where $ \\beta(t) $ is defined using distinct, epidemiologically intuitive seasonal rates, with smooth transitions between them. To begin, we develop this framework as a theoretical tool, demonstrating its capacity to generate realistic, recurring seasonal outbreaks under plausible parameter assumptions. We then calibrate and assess this model against real-world, monthly laboratory-confirmed influenza surveillance data from Ontario, Canada, for the pre-pandemic period of 2014-2019. A systematic optimization using a coarse grid search followed by stochastic refinement calibrates the model to the observed data. The calibrated model, featuring a mean immunity duration of approximately 235 days, achieves a strong fit with the historical case data (Pearson correlation $ r = 0.80 $). Our results demonstrate that this modular arithmetic-based framework is a practical and effective tool for modeling real-world influenza dynamics, successfully bridging the gap between theory and empirical surveillance.</p>","PeriodicalId":49870,"journal":{"name":"Mathematical Biosciences and Engineering","volume":"23 3","pages":"547-566"},"PeriodicalIF":2.6000,"publicationDate":"2026-01-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Mathematical Biosciences and Engineering","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.3934/mbe.2026021","RegionNum":4,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"Mathematics","Score":null,"Total":0}
引用次数: 0

Abstract

Seasonal infectious diseases like influenza pose a recurrent challenge to public health. While compartmental models, such as the susceptible-infectious-recovered-susceptible (SIRS) framework, are standard tools, representing the time-varying transmission rate, $ \beta(t) $, in an interpretable yet effective manner remains a key challenge. Existing established alternative methods for modeling seasonality use sinusoidal forcing functions, flexible splines, etc. In this paper, we propose and apply a modular approach where $ \beta(t) $ is defined using distinct, epidemiologically intuitive seasonal rates, with smooth transitions between them. To begin, we develop this framework as a theoretical tool, demonstrating its capacity to generate realistic, recurring seasonal outbreaks under plausible parameter assumptions. We then calibrate and assess this model against real-world, monthly laboratory-confirmed influenza surveillance data from Ontario, Canada, for the pre-pandemic period of 2014-2019. A systematic optimization using a coarse grid search followed by stochastic refinement calibrates the model to the observed data. The calibrated model, featuring a mean immunity duration of approximately 235 days, achieves a strong fit with the historical case data (Pearson correlation $ r = 0.80 $). Our results demonstrate that this modular arithmetic-based framework is a practical and effective tool for modeling real-world influenza dynamics, successfully bridging the gap between theory and empirical surveillance.

模块化算法作为季节性时变传播率模型的替代方法:以流感为例研究。
流感等季节性传染病对公共卫生构成经常性挑战。虽然诸如易感-感染-恢复-易感(SIRS)框架等区隔模型是代表时变传播率的标准工具,但以可解释且有效的方式进行β (t)仍然是一个关键挑战。现有的季节性建模替代方法使用正弦强迫函数、柔性样条等。在本文中,我们提出并应用了一种模块化方法,其中$ \beta(t) $使用不同的、流行病学上直观的季节性率来定义,并在它们之间平滑过渡。首先,我们将这一框架发展为一种理论工具,在合理的参数假设下证明其产生现实的、反复出现的季节性疫情的能力。然后,我们根据2014-2019年流感大流行前加拿大安大略省每月实验室确认的流感监测数据对该模型进行校准和评估。采用粗网格搜索和随机细化的系统优化将模型校准为观测数据。校正后的模型平均免疫持续时间约为235天,与历史病例数据非常吻合(Pearson相关系数r = 0.80)。我们的研究结果表明,这种基于模块化算法的框架是一种实用而有效的工具,可用于模拟真实世界的流感动态,成功地弥合了理论与经验监测之间的差距。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Mathematical Biosciences and Engineering
Mathematical Biosciences and Engineering 工程技术-数学跨学科应用
CiteScore
3.90
自引率
7.70%
发文量
586
审稿时长
>12 weeks
期刊介绍: Mathematical Biosciences and Engineering (MBE) is an interdisciplinary Open Access journal promoting cutting-edge research, technology transfer and knowledge translation about complex data and information processing. MBE publishes Research articles (long and original research); Communications (short and novel research); Expository papers; Technology Transfer and Knowledge Translation reports (description of new technologies and products); Announcements and Industrial Progress and News (announcements and even advertisement, including major conferences).
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信
小红书