Wild-type cutoff values for standard broth microdilution antimicrobial susceptibility testing of Yersinia ruckeri isolates.

IF 1.2 4区 农林科学 Q3 FISHERIES
Charles M Gieseker, Matthew E Saab, Timothy J Welch, Trevor Alexander, Kayleigh Carranza, Sandrine Baron, Laetitia Le Devendec, Athina Papadopoulou, Andrew W Joseph, David Verner-Jeffreys, Edel Light, Elliot Stanton, Amedeo Manfrin, Luana Cortinovis, Tina C Crosby, Elliott Kittel, Peter Smith
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Abstract

Yersinia ruckeri is a Gram-negative bacterium that causes enteric redmouth disease. It commonly infects farmed salmonid fishes, often requiring antimicrobial treatment. Studies on antimicrobial susceptibility patterns of Y. ruckeri have found isolates with decreased susceptibility but have lacked internationally harmonized criteria, known as epidemiological cutoff values (ECVs), which provide consensus on identifying antimicrobial resistance. To address this need, we gathered minimal inhibitory concentration (MIC) testing data for 9 antimicrobials, generated at 22°C for 24-28 and/or 44-48 h using the standard broth microdilution testing method published by the Clinical and Laboratory Standards Institute (CLSI). The dataset includes MIC data from up to 431 isolates from 7 independent laboratories. Data for each antimicrobial were analyzed with the programs Normalized Resistance Interpretation (NRI) and ECOFFinder to compare the means and standard deviations for the 2 timepoints, and to calculate wild-type cutoff values. The parameters for the timepoints were very similar, which confirmed cutoffs were only needed for the 24-28 h incubation. The cutoff values for 8 of the 9 antimicrobials are potential ECVs that have been proposed to CLSI's Subcommittee on Veterinary Antimicrobial Susceptibility Testing. Calculated cutoffs for the final antimicrobial, erythromycin, were off-scale because the MIC values clustered at higher drug concentrations. The resulting new ECVs will be included in the next edition of the VET04 supplement, which will help clinicians and researchers advance antimicrobial resistance surveillance of this bacterium.

拉克氏耶尔森菌标准肉汤微量稀释药敏试验的野生型截止值。
拉克氏耶尔森氏菌是一种革兰氏阴性菌,可引起肠道红口病。它通常感染养殖的鲑科鱼类,通常需要抗菌治疗。对拉克氏耶氏菌的药物敏感性模式的研究发现,分离株的药物敏感性有所下降,但缺乏国际统一的标准,即流行病学临界值(ecv),该标准可在确定抗菌素耐药性方面提供共识。为了满足这一需求,我们收集了9种抗菌素的最低抑制浓度(MIC)测试数据,使用临床和实验室标准研究所(CLSI)发布的标准肉汤微量稀释测试方法,在22°C下产生24-28和/或44-48小时。该数据集包括来自7个独立实验室的多达431株分离株的MIC数据。采用归一化耐药性解释(Normalized Resistance Interpretation, NRI)和ECOFFinder程序对每种抗菌素的数据进行分析,比较2个时间点的均值和标准差,并计算野生型截止值。时间点的参数非常相似,仅需要在24-28小时的孵育中确认截止时间。9种抗菌素中有8种的截止值是已向CLSI兽医抗菌素敏感性测试小组委员会提出的潜在ecv。由于MIC值聚集在较高的药物浓度,最终抗菌剂红霉素的计算截止值偏离了比例。由此产生的新ecv将被纳入下一版的VET04补编,这将有助于临床医生和研究人员推进这种细菌的抗微生物药物耐药性监测。
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来源期刊
Diseases of aquatic organisms
Diseases of aquatic organisms 农林科学-兽医学
CiteScore
3.10
自引率
0.00%
发文量
53
审稿时长
8-16 weeks
期刊介绍: DAO publishes Research Articles, Reviews, and Notes, as well as Comments/Reply Comments (for details see DAO 48:161), Theme Sections and Opinion Pieces. For details consult the Guidelines for Authors. Papers may cover all forms of life - animals, plants and microorganisms - in marine, limnetic and brackish habitats. DAO''s scope includes any research focusing on diseases in aquatic organisms, specifically: -Diseases caused by coexisting organisms, e.g. viruses, bacteria, fungi, protistans, metazoans; characterization of pathogens -Diseases caused by abiotic factors (critical intensities of environmental properties, including pollution)- Diseases due to internal circumstances (innate, idiopathic, genetic)- Diseases due to proliferative disorders (neoplasms)- Disease diagnosis, treatment and prevention- Molecular aspects of diseases- Nutritional disorders- Stress and physical injuries- Epidemiology/epizootiology- Parasitology- Toxicology- Diseases of aquatic organisms affecting human health and well-being (with the focus on the aquatic organism)- Diseases as indicators of humanity''s detrimental impact on nature- Genomics, proteomics and metabolomics of disease- Immunology and disease prevention- Animal welfare- Zoonosis
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