Robiginitalea rubriflava sp. nov. and Robiginitalea insularis sp. nov., isolated from coastal seawaters of the Yellow Sea.

IF 3.8 4区 生物学 Q2 MICROBIOLOGY
Journal of Microbiology Pub Date : 2026-02-01 Epub Date: 2026-01-28 DOI:10.71150/jm.2512009
Seungyeop Oh, Yeonjung Lim, Meora Rajeev, Jang-Cheon Cho
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引用次数: 0

Abstract

Two Gram-stain-negative, aerobic, non-motile, rod-shaped bacterial strains, designated IMCC43444T and IMCC44478T, were isolated from surface seawater collected off Deokjeok Island and Jangbong Island, respectively, in the Yellow Sea. The two strains shared 100% 16S rRNA gene sequence similarity with each other but exhibited ≤ 96.2% similarity to validly published species of the genus Robiginitalea. Complete whole-genome sequences of IMCC43444T and IMCC44478T were 3.21 Mb and 3.30 Mb in size, with DNA G + C contents of 46.5% and 46.4%, respectively. Genome-based relatedness analyses revealed average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values of 90.7% and 42.9% between the two strains, which are well below the accepted species-level thresholds. Furthermore, ANI (≤ 70.2%) and dDDH (≤ 17.8%) values relative to type strains of Robiginitalea species supported the conclusion that strains IMCC43444T and IMCC44478T each represent novel species within the genus. Chemotaxonomic characterization showed that iso-C15:0, iso-C17:0 3-OH and iso-C15:1 G were the major fatty acids of both strains; menaquinone-6 (MK-6) was the sole isoprenoid quinone; and the major polar lipids comprised phosphatidylethanolamine, glycolipids, aminolipids, phospholipids, and other unidentified lipids. Based on phylogenetic, genomic, and phenotypic evidence, strains IMCC43444T and IMCC44478T are proposed as two novel species, Robiginitalea rubriflava sp. nov. and Robiginitalea insularis sp. nov., respectively. The type strains are IMCC43444T (= KCTC 102397T = JCM 37893T) and IMCC44478T (= KCTC 102398T = JCM 37894T).

红黄robiginitala sp. 11 .和海岛robiginitala sp. 11 .,从黄海沿岸海水分离。
从黄海德济岛和长峰岛表层海水中分离出2株革兰氏阴性、需氧、非运动杆状细菌,分别命名为IMCC43444T和IMCC44478T。两个菌株的16S rRNA基因序列相似性为100%,但与已发表的Robiginitalea属物种的相似性≤96.2%。IMCC43444T和IMCC44478T全基因组序列大小分别为3.21 Mb和3.30 Mb, DNA G + C含量分别为46.5%和46.4%。基于基因组的相关性分析显示,两株菌株的平均核苷酸同源性(ANI)和数字DNA-DNA杂交(dDDH)值分别为90.7%和42.9%,远低于公认的物种水平阈值。此外,相对于Robiginitalea种类型菌株的ANI(≤70.2%)和dDDH(≤17.8%)值支持菌株IMCC43444T和IMCC44478T均为属内新种的结论。化学分类鉴定表明,这两种菌株的主要脂肪酸为iso-C15:0、iso-C17:0 3-OH和iso-C15:1 G;甲基萘醌-6 (MK-6)是唯一的类异戊二烯醌;主要的极性脂质包括磷脂酰乙醇胺、糖脂、氨基脂、磷脂和其他未识别的脂质。基于系统发育、基因组学和表型证据,提出菌株IMCC43444T和IMCC44478T分别为rubriflava Robiginitalea sp. nov和Robiginitalea insularis sp. nov两个新种。类型菌株为IMCC43444T (= KCTC 102397T = JCM 37893T)和IMCC44478T (= KCTC 102398T = JCM 37894T)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Journal of Microbiology
Journal of Microbiology 生物-微生物学
CiteScore
5.70
自引率
3.30%
发文量
0
审稿时长
3 months
期刊介绍: Publishes papers that deal with research on microorganisms, including archaea, bacteria, yeasts, fungi, microalgae, protozoa, and simple eukaryotic microorganisms. Topics considered for publication include Microbial Systematics, Evolutionary Microbiology, Microbial Ecology, Environmental Microbiology, Microbial Genetics, Genomics, Molecular Biology, Microbial Physiology, Biochemistry, Microbial Pathogenesis, Host-Microbe Interaction, Systems Microbiology, Synthetic Microbiology, Bioinformatics and Virology. Manuscripts dealing with simple identification of microorganism(s), cloning of a known gene and its expression in a microbial host, and clinical statistics will not be considered for publication by JM.
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