Quantifying the Denticle Multiverse: A Standardized Coding System to Capture Three Dimensional Morphological Variations for Quantitative Evolutionary and Ecological Studies of Elasmobranch Denticles.

IF 2 4区 生物学 Q2 BIOLOGY
Integrative Organismal Biology Pub Date : 2025-05-13 eCollection Date: 2025-01-01 DOI:10.1093/iob/obaf021
L D Rubin, G J Fraser, M K Gabler-Smith, G V Lauder, W V Ribeiro, D F B Vaz, N Wallis-Mauro, E C Sibert
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Abstract

Dermal denticles-microscopic tooth-like scales-are a major defining feature of elasmobranch skin, and are of interest to a wide array of fields, including paleontology, evolutionary biology, developmental biology, functional morphology, and bio-inspired design. While dermal denticle research is a growing field, there is currently no standardized vocabulary or framework to compare denticle morphology across research fields, siloing, and limiting denticle research efforts. Here, we present a morphological framework, which includes a character code that comprehensively captures denticle morphology from a wide diversity of denticle sampling types and imaging methods, and is backed by an easy-to-use google sheets-based coding tool and R package for replicating disparity analyses. The code is based on a wide-spread literature review of published denticle images, scanning electron microscope (SEMs), and computed tomography (CT) scans of extant shark denticles, and a review of tens of thousands of fossil denticles from pelagic ocean sediments dating back over 100 million years. The code's flexibility and replicability facilitate comparison across studies and independent research teams, and the addition of novel character categories. Denticle morphotypes are defined as denticles with unique combinations of character traits. This coding system facilitates morphologically backed disparity analyses of denticle morphological diversity, whether through deep time, across the body of a shark, or across a time-series of development, providing a more detailed, quantitative, and universal tool for analyzing denticle morphology across studies.

量化小齿多元宇宙:一个标准化的编码系统,以捕获三维形态变化的定量进化和生态研究的Elasmobranch小齿。
真皮小齿-微观的牙齿状鳞片-是弹性体皮肤的主要特征,并且是广泛领域的兴趣,包括古生物学,进化生物学,发育生物学,功能形态学和生物启发设计。虽然真皮小齿研究是一个不断发展的领域,但目前还没有标准化的词汇或框架来比较不同研究领域的小齿形态,从而限制了小齿的研究工作。在这里,我们提出了一个形态学框架,其中包括一个字符代码,从各种各样的小齿采样类型和成像方法中全面捕获小齿形态,并由一个易于使用的基于谷歌表的编码工具和R包支持,用于复制差异分析。该代码基于对已发表的齿状图像、扫描电子显微镜(sem)和计算机断层扫描(CT)扫描的广泛文献综述,以及对可追溯到1亿多年前的远洋海洋沉积物中数以万计的齿状化石的回顾。该代码的灵活性和可复制性促进了研究和独立研究团队之间的比较,并增加了新的字符类别。小齿形态被定义为具有独特性状组合的小齿。该编码系统促进了齿突形态多样性的形态学支持差异分析,无论是通过深时间,整个鲨鱼身体,还是跨越时间序列的发展,为分析研究中的齿突形态提供了更详细,定量和通用的工具。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
3.70
自引率
6.70%
发文量
48
审稿时长
20 weeks
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