Mimicking exogenous amino acids: Raman-based and machine learning tracking of Colon cancer cells metabolism

IF 4 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
Monika Kopeć, Karolina Beton-Mysur, Arkadiusz Jarota, Beata Brożek-Płuska
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引用次数: 0

Abstract

Amino acids are fundamental biomolecules that constitute the building blocks of proteins. Monitoring their dysregulation and fluctuations serves as an important indicator of human health. The aim of this study is to explore the role of exogenous amino acids metabolism in colon cancer development. Raman spectroscopy and Raman imaging were employed to investigate biochemical changes in normal human colon cells (CCD-18Co) and cancerous colon cells (Caco-2), both untreated and supplemented with leucine, threonine, and arginine. Spectroscopic data were analyzed using chemometric methods, specifically Partial Least Squares Discriminant Analysis (PLS-DA). Raman spectroscopy, combined with chemometric approach, identified unique Raman biomarkers – 1088/1262, 1444/1660, 1580/1004, and 1630/1444 - that correspond to changes in nucleic acids, lipids/lipids+Amide I, proteins, and lipids, respectively, in both normal and cancer cells supplemented with amino acids. These findings underscore the significant potential of Raman spectroscopy and Raman imaging as powerful tools for investigating the role of exogenous amino acids in colon cancer progression. We have also shown that the S₁-state lifetime of tetra-sulphonated aluminum phthalocyanine remains unaffected by amino acid supplementation, as confirmed by femtosecond transient absorption spectroscopy, supporting its stability as a photosensitizer for photodynamic therapy.

Abstract Image

模拟外源性氨基酸:基于拉曼和机器学习的结肠癌细胞代谢跟踪
氨基酸是构成蛋白质基石的基本生物分子。监测它们的失调和波动是人类健康的重要指标。本研究旨在探讨外源性氨基酸代谢在结肠癌发生发展中的作用。采用拉曼光谱和拉曼成像技术研究了未处理和补充亮氨酸、苏氨酸和精氨酸的正常人结肠细胞(CCD-18Co)和癌变结肠细胞(Caco-2)的生化变化。光谱数据分析使用化学计量学方法,特别是偏最小二乘判别分析(PLS-DA)。拉曼光谱与化学计量学方法相结合,鉴定出独特的拉曼生物标志物- 1088/1262、1444/1660、1580/1004和1630/1444 -分别对应于补充氨基酸的正常细胞和癌细胞中核酸、脂质/脂质+酰胺I、蛋白质和脂质的变化。这些发现强调了拉曼光谱和拉曼成像作为研究外源氨基酸在结肠癌进展中的作用的强大工具的巨大潜力。我们还表明,经飞秒瞬态吸收光谱证实,四磺化酞青铝的S₁态寿命不受氨基酸补充的影响,支持其作为光动力治疗的光敏剂的稳定性。
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来源期刊
CiteScore
12.10
自引率
1.90%
发文量
161
审稿时长
37 days
期刊介绍: The Journal of Photochemistry and Photobiology B: Biology provides a forum for the publication of papers relating to the various aspects of photobiology, as well as a means for communication in this multidisciplinary field. The scope includes: - Bioluminescence - Chronobiology - DNA repair - Environmental photobiology - Nanotechnology in photobiology - Photocarcinogenesis - Photochemistry of biomolecules - Photodynamic therapy - Photomedicine - Photomorphogenesis - Photomovement - Photoreception - Photosensitization - Photosynthesis - Phototechnology - Spectroscopy of biological systems - UV and visible radiation effects and vision.
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