{"title":"Diagnostic tools for detection of pathogens and diseases in plantation crops.","authors":"Devayani Sarmah, Shanmuga Priya Dhanabalan, Iruthayasamy Johnson, Chinnathambi Sekar, Xavier Anitha Mary, Muthusamy Karthikeyan","doi":"10.1016/j.mimet.2025.107294","DOIUrl":null,"url":null,"abstract":"<p><p>Plant pathogens are serious threats to the cultivation of commercially important plantations and result in a significant reduction in both quality and yield. Timely and precise diagnosis of these diseases is critical for adopting effective management measures to avoid crop loss. This review provides a comprehensive overview of technological advancements for pathogen and disease detection . Various methods have been developed to detect pathogens at different stages of infection. Traditional approaches such as visual inspection and symptom-based diagnosis are simple and cost-effective but detect diseases only after symptoms appear, limiting early intervention. Microscopy and culture-based techniques allow accurate identification of pathogens, especially fungi and bacteria, but are time-consuming and require skilled personnel. Serological methods, such as enzyme-linked immunosorbent assay (ELISA), provide rapid and specific detection and are commonly used for pathogen screening in large-scale surveys. Molecular techniques like polymerase chain reaction (PCR) and reverse transcription PCR (RT-PCR) have revolutionized plant pathogen detection by offering high sensitivity and specificity. Recently, technologies such as microfluidics, digital PCR, biosensor-based detection, and remote sensing have emerged as promising alternatives, offering efficiency and the potential for rapid diagnostics, thereby enhancing timely disease surveillance.</p>","PeriodicalId":16409,"journal":{"name":"Journal of microbiological methods","volume":" ","pages":"107294"},"PeriodicalIF":1.9000,"publicationDate":"2025-10-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of microbiological methods","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1016/j.mimet.2025.107294","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
引用次数: 0
Abstract
Plant pathogens are serious threats to the cultivation of commercially important plantations and result in a significant reduction in both quality and yield. Timely and precise diagnosis of these diseases is critical for adopting effective management measures to avoid crop loss. This review provides a comprehensive overview of technological advancements for pathogen and disease detection . Various methods have been developed to detect pathogens at different stages of infection. Traditional approaches such as visual inspection and symptom-based diagnosis are simple and cost-effective but detect diseases only after symptoms appear, limiting early intervention. Microscopy and culture-based techniques allow accurate identification of pathogens, especially fungi and bacteria, but are time-consuming and require skilled personnel. Serological methods, such as enzyme-linked immunosorbent assay (ELISA), provide rapid and specific detection and are commonly used for pathogen screening in large-scale surveys. Molecular techniques like polymerase chain reaction (PCR) and reverse transcription PCR (RT-PCR) have revolutionized plant pathogen detection by offering high sensitivity and specificity. Recently, technologies such as microfluidics, digital PCR, biosensor-based detection, and remote sensing have emerged as promising alternatives, offering efficiency and the potential for rapid diagnostics, thereby enhancing timely disease surveillance.
期刊介绍:
The Journal of Microbiological Methods publishes scholarly and original articles, notes and review articles. These articles must include novel and/or state-of-the-art methods, or significant improvements to existing methods. Novel and innovative applications of current methods that are validated and useful will also be published. JMM strives for scholarship, innovation and excellence. This demands scientific rigour, the best available methods and technologies, correctly replicated experiments/tests, the inclusion of proper controls, calibrations, and the correct statistical analysis. The presentation of the data must support the interpretation of the method/approach.
All aspects of microbiology are covered, except virology. These include agricultural microbiology, applied and environmental microbiology, bioassays, bioinformatics, biotechnology, biochemical microbiology, clinical microbiology, diagnostics, food monitoring and quality control microbiology, microbial genetics and genomics, geomicrobiology, microbiome methods regardless of habitat, high through-put sequencing methods and analysis, microbial pathogenesis and host responses, metabolomics, metagenomics, metaproteomics, microbial ecology and diversity, microbial physiology, microbial ultra-structure, microscopic and imaging methods, molecular microbiology, mycology, novel mathematical microbiology and modelling, parasitology, plant-microbe interactions, protein markers/profiles, proteomics, pyrosequencing, public health microbiology, radioisotopes applied to microbiology, robotics applied to microbiological methods,rumen microbiology, microbiological methods for space missions and extreme environments, sampling methods and samplers, soil and sediment microbiology, transcriptomics, veterinary microbiology, sero-diagnostics and typing/identification.