Molecular Structure of a Model S-Alkylthiolanium Ionic Liquid Based on NMR Measurements and DFT Predictions for Its Enantiomeric C-H···I- Hydrogen Bonded Units Achieved in an Unusual Use of QST2 and IRC Methods.
{"title":"Molecular Structure of a Model <i>S</i>-Alkylthiolanium Ionic Liquid Based on NMR Measurements and DFT Predictions for Its Enantiomeric C-H···I<sup>-</sup> Hydrogen Bonded Units Achieved in an Unusual Use of QST2 and IRC Methods.","authors":"Ryszard B Nazarski, Gerhard Hägele","doi":"10.1021/acs.jpca.5c05146","DOIUrl":null,"url":null,"abstract":"<p><p>Using atypical input geometries that led to asymmetric transition state (TS) structures, it was possible to construct the raw geometries of a majority of both units of the title ionic liquid <b>1a</b> of type A/B in the D<sub>2</sub>O solution, mainly in a combination of QST2 and IRC methods. Their refinement in all-electron DFT-B3LYP calculations using a locally dense basis sets (LDBS) approach led to 34 complete pairs A/B as binary sets of enantiomeric forms of type A and B, which, according to time-averaged NMR spectra and calculated Gibbs free energy (Δ<i>G</i>) data, exist in a fast symmetrical two-site exchange A ⇌ B. The availability of these structurally diverse structures, in which iodine ion (I<sup>-</sup>) occupies various spatial positions, stabilized by weak C-H···I<sup>-</sup> hydrogen bonds confirmed by QTAIM analysis, made it possible to test selected DFT methods to calculate the δ<sub>H</sub>, δ<sub>C</sub>, and <sup><i>n</i></sup><i>J</i><sub>HH</sub> data against their experimental values. A modified joint two-nucleus approach (<sup>1</sup>H/<sup>13</sup>C) with factor <i>m</i><sub>H</sub> = 6 was also used. The efficiency of these predictions for an ensemble of all pairs A/B, which is the multicomponent molecular structure of <b>1a</b> at the theoretical level used, was analyzed in light of their populations arising from consideration of Δ<i>G</i> data.</p>","PeriodicalId":59,"journal":{"name":"The Journal of Physical Chemistry A","volume":" ","pages":""},"PeriodicalIF":2.8000,"publicationDate":"2025-10-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"The Journal of Physical Chemistry A","FirstCategoryId":"1","ListUrlMain":"https://doi.org/10.1021/acs.jpca.5c05146","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
引用次数: 0
Abstract
Using atypical input geometries that led to asymmetric transition state (TS) structures, it was possible to construct the raw geometries of a majority of both units of the title ionic liquid 1a of type A/B in the D2O solution, mainly in a combination of QST2 and IRC methods. Their refinement in all-electron DFT-B3LYP calculations using a locally dense basis sets (LDBS) approach led to 34 complete pairs A/B as binary sets of enantiomeric forms of type A and B, which, according to time-averaged NMR spectra and calculated Gibbs free energy (ΔG) data, exist in a fast symmetrical two-site exchange A ⇌ B. The availability of these structurally diverse structures, in which iodine ion (I-) occupies various spatial positions, stabilized by weak C-H···I- hydrogen bonds confirmed by QTAIM analysis, made it possible to test selected DFT methods to calculate the δH, δC, and nJHH data against their experimental values. A modified joint two-nucleus approach (1H/13C) with factor mH = 6 was also used. The efficiency of these predictions for an ensemble of all pairs A/B, which is the multicomponent molecular structure of 1a at the theoretical level used, was analyzed in light of their populations arising from consideration of ΔG data.
期刊介绍:
The Journal of Physical Chemistry A is devoted to reporting new and original experimental and theoretical basic research of interest to physical chemists, biophysical chemists, and chemical physicists.