Ramesh Pramanik, Ramu K. Yadav, Sakuntala Chatterjee
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引用次数: 0
Abstract
When exposed to a time-periodic chemical signal, an E.coli cell responds by modulating its receptor activity in a similar time-periodic manner. But there is a phase lag between the applied signal and activity response. We study the variation of activity amplitude and phase lag as a function of applied frequency \(\omega \), using numerical simulations. The amplitude increases with \(\omega \), reaches a plateau and then decreases again for large \(\omega \). The phase lag increases monotonically with \(\omega \) and finally saturates to \(3 \pi /2\) when \(\omega \) is large. The activity is no more a single-valued function of the attractant signal, and plotting activity vs attractant concentration over one complete time period generates a loop. We monitor the loop area as a function of \(\omega \) and find two peaks for small and large \(\omega \) and a sharp minimum at intermediate \(\omega \) values. We explain these results from an interplay between the timescales associated with adaptation, activity switching and applied signal variation. In particular, for very large \(\omega \) the quasi-equilibrium approximation for activity dynamics breaks down, which has not been explored in earlier studies. We perform analytical calculation in this limit and find good agreement with our simulation results.
期刊介绍:
EPJ E publishes papers describing advances in the understanding of physical aspects of Soft, Liquid and Living Systems.
Soft matter is a generic term for a large group of condensed, often heterogeneous systems -- often also called complex fluids -- that display a large response to weak external perturbations and that possess properties governed by slow internal dynamics.
Flowing matter refers to all systems that can actually flow, from simple to multiphase liquids, from foams to granular matter.
Living matter concerns the new physics that emerges from novel insights into the properties and behaviours of living systems. Furthermore, it aims at developing new concepts and quantitative approaches for the study of biological phenomena. Approaches from soft matter physics and statistical physics play a key role in this research.
The journal includes reports of experimental, computational and theoretical studies and appeals to the broad interdisciplinary communities including physics, chemistry, biology, mathematics and materials science.