Challenges and Opportunities in Characterizing the Genetics of Stuttering: From Sample Acquisition to Functional Interpretation of the Genome.

IF 2.2
Dillon G Pruett, Alyssa C Scartozzi, Hannah G Polikowsky, Heather M Highland, Doug M Shaw, Lauren E Petty, Alex S Petty, Shelly Jo Kraft, Jennifer E Below
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Abstract

Purpose: Converging etiological evidence supports a genetic risk for developmental stuttering; however, major gaps detailing the genetic architecture remain. Technological advances in genetics have allowed us to explore novel approaches to analyzing this complex trait, but conducting robust and replicable genetic studies requires large, well-phenotyped cohorts of subjects. This article reviews previous research strategies employed to overcome these challenges in identifying genetic variants associated with stuttering and translating stuttering-associated variants into molecular and cellular mechanisms.

Method: We present an overview of data sources and strategies research teams have utilized for the genetic study of stuttering, highlighting the advantages and limitations of each approach. Primary data sources include (a) the International Stuttering Project, (b) the National Longitudinal Study of Adolescent to Adult Health, (c) BioVU, and (d) 23andMe, Inc. In addition to genome-wide association studies (GWASs), we review multiple post-GWAS follow-up analyses to probe the functional impact of stuttering-associated genetic variants and offer new transcriptome-wide analyses.

Results: To date, a diverse array of approaches has resulted in the identification of over 50 stuttering-associated genes. Many genetic associations were near or within genes previously linked to known neurological traits, highlighting a neurological role in stuttering. Additionally, validation studies using polygenic risk scores suggested a high level of genetic concordance between our samples. Functional follow-up studies suggest stuttering-associated variants may affect gene expression in tissues relevant to speech-related structures and neural correlates.

Conclusions: While understanding how specific regions of the genome contribute to stuttering risk remains complex, research from our team and others has utilized a variety of data sources in an attempt to overcome previous limitations in the identification of genetic variation associated with stuttering. As the field of genetics evolves toward large-scale biobanks for research and discovery, prioritizing inclusion of traits such as stuttering will be key.

Supplemental material: https://doi.org/10.23641/asha.30299764.

表征口吃遗传学的挑战和机遇:从样本采集到基因组的功能解释。
目的:越来越多的病因学证据支持发育性口吃的遗传风险;然而,详细描述遗传结构的主要差距仍然存在。遗传学技术的进步使我们能够探索分析这一复杂特征的新方法,但进行可靠且可复制的遗传研究需要大量的、表型良好的受试者。本文回顾了以往的研究策略,以克服这些挑战,识别口吃相关的遗传变异,并将口吃相关的变异转化为分子和细胞机制。方法:我们概述了研究团队用于口吃遗传研究的数据来源和策略,并强调了每种方法的优点和局限性。主要数据来源包括(a)国际口吃项目,(b)全国青少年至成人健康纵向研究,(c) BioVU和(d) 23andMe, Inc.。除了全基因组关联研究(GWASs),我们回顾了多个gwas后的随访分析,以探索口吃相关遗传变异的功能影响,并提供新的转录组范围分析。结果:迄今为止,各种各样的方法已经鉴定出50多种口吃相关基因。许多遗传关联在先前与已知神经特征相关的基因附近或内部,突出了神经在口吃中的作用。此外,使用多基因风险评分的验证研究表明,我们的样本之间存在高水平的遗传一致性。功能性随访研究表明,口吃相关的变异可能会影响语言相关结构和神经相关组织的基因表达。结论:虽然了解基因组的特定区域如何导致口吃风险仍然很复杂,但我们的团队和其他人的研究利用了各种数据来源,试图克服先前在确定与口吃相关的遗传变异方面的局限性。随着遗传学领域向研究和发现的大规模生物库发展,优先考虑口吃等特征将是关键。补充资料:https://doi.org/10.23641/asha.30299764。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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