Bioinformatic Design of the Secreted form of SAG2 Protein as a Toxoplasma gondii Vaccine Candidate.

Q3 Biochemistry, Genetics and Molecular Biology
Arezoo Mesri, Negar Asadi, Hadi Maleki-Kakelar, Mortaza Taheri-Anganeh
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引用次数: 0

Abstract

Introduction: Toxoplasmosis is one of the most common parasitic infections transmitted between humans and animals, caused by the protozoan Toxoplasma gondii. This organism acts as an obligate intracellular parasite, presenting an active and rapidly proliferating form known as a tachyzoite, in addition to two durable forms: the tissue cyst and the oocyst. Due to the considerable global impact of chronic infections in various host species, especially in humans and domestic animals, creating and producing an effective vaccine for preventing and managing toxoplasmosis is critically essential. The excretory antigens of Toxoplasma gondii play a vital role in vaccine development and diagnostic processes, with the SAG2 antigen being particularly significant. At present, sophisticated bioinformatics tools are utilized to design efficient signal peptides. This research will adopt an in silico approach to evaluating different signal peptides.

Methods: The signal peptide sequence was obtained from the Signal Peptide website and Uniprot. Following this, SignalP was utilized to predict the signal peptides and determine the positions of their cleavage sites. The ProtProm tool was then employed to assess the physicochemical characteristics and solubility. Furthermore, ProtCompB was used to forecast the subcellular localization of the fusion protein.

Results: Of the 50 signal peptides analyzed, 49 were excluded based on SignalP criteria. The signal peptide with the highest aliphatic index was HDEA_ECOLI, while TORT_ECOLI exhibited the highest GRAVY value.

Discussion: Additionally, SAG2, when fused with all signal peptides, was explicitly designed for the Sec pathway, except NAPA_ECOLI, MBHT_ECOLI, CUEO_ECOLI, and OPGD_ECOLI.

Conclusion: An appropriate signal peptide was recognized for the fusion and translocation of SAG2 into the extracellular environment. While additional experimental studies are necessary for conclusive validation.

SAG2蛋白分泌形式作为刚地弓形虫候选疫苗的生物信息学设计
简介:弓形虫病是由弓形虫原虫引起的一种最常见的人与动物之间传播的寄生虫感染。这种生物作为一种专性细胞内寄生虫,除了两种持久的形式:组织囊肿和卵囊外,还表现出一种被称为速殖子的活跃和快速增殖的形式。由于各种宿主物种,特别是人类和家畜的慢性感染对全球产生重大影响,因此研制和生产有效的弓形虫病预防和管理疫苗至关重要。刚地弓形虫的排泄抗原在疫苗研制和诊断过程中起着至关重要的作用,其中SAG2抗原尤为重要。目前,复杂的生物信息学工具被用于设计高效的信号肽。本研究将采用计算机方法来评估不同的信号肽。方法:从signal peptide网站和Uniprot上获取信号肽序列。随后,利用SignalP预测信号肽并确定其切割位点的位置。然后使用ProtProm工具评估其物理化学特性和溶解度。此外,利用ProtCompB预测融合蛋白的亚细胞定位。结果:在分析的50个信号肽中,49个根据SignalP标准被排除。脂肪指数最高的信号肽为HDEA_ECOLI,肉汁值最高的信号肽为TORT_ECOLI。讨论:此外,除了NAPA_ECOLI、MBHT_ECOLI、CUEO_ECOLI和OPGD_ECOLI外,SAG2与所有信号肽融合后,明确设计用于Sec途径。结论:发现了一种合适的信号肽,可以促进SAG2在细胞外环境中的融合和转运。而进一步的实验研究是必要的结论性验证。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Recent patents on biotechnology
Recent patents on biotechnology Biochemistry, Genetics and Molecular Biology-Biotechnology
CiteScore
2.90
自引率
0.00%
发文量
51
期刊介绍: Recent Patents on Biotechnology publishes review articles by experts on recent patents on biotechnology. A selection of important and recent patents on biotechnology is also included in the journal. The journal is essential reading for all researchers involved in all fields of biotechnology.
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