Optimizing TB Bacteria Detection Efficiency: Utilizing RetinaNet-Based Preprocessing Techniques for Small Image Patch Classification.

IF 1.3 Q2 ENGINEERING, BIOMEDICAL
International Journal of Biomedical Imaging Pub Date : 2025-10-05 eCollection Date: 2025-01-01 DOI:10.1155/ijbi/3559598
Shwetha V, Barnini Banerjee, Vijaya Laxmi, Priya Kamath
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引用次数: 0

Abstract

Tuberculosis (TB), caused by Mycobacterium tuberculosis, is a re-emerging disease that necessitates early and accurate detection. While Ziehl-Neelsen (ZN) staining is effective in highlighting bacterial morphology, automation significantly accelerates the diagnostic workflow. However, detecting TB bacilli-which are typically much smaller than white blood cells (WBCs)-in stained images remains a considerable challenge. This study leverages the ZNSM-iDB dataset, which comprises approximately 2000 publicly available images captured using different staining methods. Notably, 800 images are fully stained with the ZN technique. We propose a novel two-stage pipeline where a RetinaNet-based object detection model functions as a preprocessing step to localize and isolate TB bacilli and WBCs from ZN-stained images. To address the challenges posed by low spatial resolution and background interference, the RetinaNet model is enhanced with dilated convolutional layers to improve fine-grained feature extraction. This approach not only facilitates accurate detection of small objects but also achieves an average precision (AP) of 0.94 for WBCs and 0.97 for TB bacilli. Following detection, a patch-based convolutional neural network (CNN) classifier is employed to classify the extracted regions. The proposed CNN model achieves a remarkable classification accuracy of 93%, outperforming other traditional CNN architectures. This framework demonstrates a robust and scalable solution for automated TB screening using ZN-stained microscopy images.

优化结核菌检测效率:利用基于retinanet的预处理技术进行小图像斑块分类。
由结核分枝杆菌引起的结核病是一种重新出现的疾病,需要及早准确地发现。虽然Ziehl-Neelsen (ZN)染色在突出细菌形态方面是有效的,但自动化显著加快了诊断工作流程。然而,在染色图像中检测结核杆菌(通常比白细胞小得多)仍然是一个相当大的挑战。本研究利用了ZNSM-iDB数据集,该数据集包括使用不同染色方法捕获的大约2000张公开可用图像。值得注意的是,有800张图像用ZN技术完全染色。我们提出了一种新的两阶段流水线,其中基于retinanet的目标检测模型作为预处理步骤,从锌染色图像中定位和分离结核杆菌和白细胞。为了解决低空间分辨率和背景干扰所带来的挑战,对retanet模型进行了扩展卷积层的增强,以提高细粒度特征提取。该方法不仅有利于小物体的准确检测,而且白细胞和结核杆菌的平均检测精度(AP)分别为0.94和0.97。检测后,使用基于patch的卷积神经网络(CNN)分类器对提取的区域进行分类。本文提出的CNN模型的分类准确率达到93%,优于其他传统的CNN架构。该框架展示了使用锌染色显微镜图像进行自动结核病筛查的强大且可扩展的解决方案。
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来源期刊
CiteScore
12.00
自引率
0.00%
发文量
11
审稿时长
20 weeks
期刊介绍: The International Journal of Biomedical Imaging is managed by a board of editors comprising internationally renowned active researchers. The journal is freely accessible online and also offered for purchase in print format. It employs a web-based review system to ensure swift turnaround times while maintaining high standards. In addition to regular issues, special issues are organized by guest editors. The subject areas covered include (but are not limited to): Digital radiography and tomosynthesis X-ray computed tomography (CT) Magnetic resonance imaging (MRI) Single photon emission computed tomography (SPECT) Positron emission tomography (PET) Ultrasound imaging Diffuse optical tomography, coherence, fluorescence, bioluminescence tomography, impedance tomography Neutron imaging for biomedical applications Magnetic and optical spectroscopy, and optical biopsy Optical, electron, scanning tunneling/atomic force microscopy Small animal imaging Functional, cellular, and molecular imaging Imaging assays for screening and molecular analysis Microarray image analysis and bioinformatics Emerging biomedical imaging techniques Imaging modality fusion Biomedical imaging instrumentation Biomedical image processing, pattern recognition, and analysis Biomedical image visualization, compression, transmission, and storage Imaging and modeling related to systems biology and systems biomedicine Applied mathematics, applied physics, and chemistry related to biomedical imaging Grid-enabling technology for biomedical imaging and informatics
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