NMCR-6, a novel nonmobile colistin resistance gene in Vibrio bacteria: full characterization and global perspective

Xinkun Zhu , Junyang Ma , Renge Hu , Qing Yang , Lei Yang , Shu Li , Yuanhuan Kang , Zhenlin Liang , Hany M. Elsheikha , Wei Cong
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Abstract

Objective

Amid rising bacterial resistance, polymyxins are a critical last resort against multidrug-resistant Gram-negative infections. Understanding and predicting the emergence of novel, nonmobile colistin resistance (NMCR) genes are essential to preserving their efficacy and preventing potential resistance crises.

Methods

Following the discovery of a high-level polymyxin B-resistant Vibrio harveyi strain WHSS0915, which exhibited antimicrobial resistance, we characterized the chromosomally encoded polymyxin-resistance protein NMCR-6 (WHSS0915). Through BLASTP searches against the Pan-Vibrio protein database, we identified the chromosomal eptA in Vibrio species as a NMCR (NMCR-6). We then investigated its global epidemiology and the potential determinants contributing to the spread of NMCR-6-bearing Vibrio strains.

Results

We identified and characterized the NMCR-6 protein in the V. harveyi strain WHSS0915. BLASTP searches based on the protein sequence revealed 14 158 sequences with over 60% homology to NMCR-6. Thirteen subtypes, named NMCR-6.1 to NMCR-6.13 according to the year of their earliest publication were classified. Phylogenetic analyses showed NMCR-6 variants form a distinctive branch among other mobile colistin resistance (MCR)/NMCR proteins. Statistical analysis of pathogenic Vibrio hosts carrying NMCR-6 revealed a broad distribution across different sample sources, detecting it in 7 clinically significant Vibrio species, notably V. parahaemolyticus. A global geographical analysis of NMCR-6 Vibrio hosts suggested that coastal extent, latitude, and temperature influence the distribution of NMCR-6 harboring Vibrio hosts.

Conclusion

Our research defined and evaluated the global epidemiology of NMCR-6 in Vibrio species, revealing the dissemination of resistance genes within pathogenic Vibrio and the associated public health risks. This knowledge will aid in predicting the emergence of new mobile colistin resistance genes.

Abstract Image

一种新的弧菌非移动粘菌素耐药基因NMCR-6:全面表征和全球视角
目的在细菌耐药性上升的情况下,多粘菌素是对抗多重耐药革兰氏阴性感染的关键手段。了解和预测新型非移动粘菌素耐药(NMCR)基因的出现对于保持其有效性和预防潜在的耐药危机至关重要。方法在发现高水平耐多粘菌素b的哈维弧菌菌株WHSS0915后,对其染色体编码的耐多粘菌素蛋白NMCR-6 (WHSS0915)进行了鉴定。通过对Pan-Vibrio蛋白数据库的BLASTP搜索,我们鉴定出弧菌种的染色体eptA为NMCR (NMCR-6)。然后,我们调查了其全球流行病学和影响携带nmcr -6的弧菌菌株传播的潜在决定因素。结果在哈维氏菌WHSS0915中鉴定并鉴定了NMCR-6蛋白。基于蛋白质序列的BLASTP搜索显示,与NMCR-6同源性超过60%的序列为14 158个。13个亚型,根据其最早出版的年份命名为NMCR-6.1至NMCR-6.13。系统发育分析表明,NMCR-6变体在其他移动粘菌素抗性(MCR)/NMCR蛋白中形成了一个独特的分支。对携带NMCR-6的致病性弧菌宿主的统计分析显示,NMCR-6在不同样品来源的广泛分布,在7种临床意义显著的弧菌中检测到NMCR-6,其中以副溶血性弧菌最为明显。对NMCR-6弧菌宿主的全球地理分析表明,沿海范围、纬度和温度影响着NMCR-6弧菌宿主的分布。结论本研究明确并评估了NMCR-6在弧菌种群中的全球流行病学,揭示了致病性弧菌中耐药基因的传播及其相关的公共卫生风险。这一知识将有助于预测新的移动粘菌素耐药基因的出现。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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