Genomic Loci of Radiation-induced Lung Disease in a Mouse Model: Refinement and Candidate Gene Analysis.

IF 2.7 3区 医学 Q2 BIOLOGY
Ian Johnson, Nicole Ferreira, Vassilena Sharlandjieva, Laetitia Sabatier, Derek Hyde, Erin E McCurry, Kirsty Milligan, Christina K Haston
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Abstract

Susceptibility to radiation-induced lung disease differs among people and among inbred strains of mice; C3H/HeJ mice develop early onset distress from pneumonitis and C57BL/6J mice present later onset pneumonitis with fibrosis. Previous studies revealed C3H/HeJ alleles at a 28 Mb locus on chromosome 2 to be linked to early onset distress and at an 18 Mb locus on chromosome 17 (called Radpf1 for radiation-induced pulmonary fibrosis-1) to decreased fibrosis in whole-thorax irradiated mice. To potentially reduce these genomic intervals, parental chr17-subcongenic mice with 0.71 Mb of C3H/HeJ alleles, and chr 2-congenic mice with region-spanning C3H/HeJ alleles from 95 to 123 Mb, and four lines of subcongenic mice received 16 Gy whole thorax irradiation and were assessed for onset of respiratory distress and histological lung disease at distress. One hundred percent of irradiated C3H/HeJ and C57BL/6J mice exhibited respiratory distress from pneumonitis and pneumonitis with fibrosis (6.8% of lung), respectively, while 18/19 chr17-subcongenic mice survived to 25 weeks post-treatment without symptoms of distress and with significantly decreased radiation-induced pulmonary fibrosis (0.3% of lung, P = 0.002). Of the chr2-subcongenics, mice of one line, which we refer to as Pneum1 (pneumonitis one), succumbed at an average of 20.2 ± 1.1 weeks postirradiation in females and 26.3 ± 1.2 weeks in males (P > 0.22 vs. congenic mice), reducing this locus to 5.6 Mb. Bioinformatic analyses revealed 114 candidate genes within these reduced intervals, with effects on pathways including on immune pathways. Mapping refined genetic susceptibility to radiation-induced lung disease in mice.

辐射诱发肺部疾病小鼠模型的基因组位点:改进和候选基因分析。
对辐射引起的肺部疾病的易感性在人和近交系小鼠之间是不同的;C3H/HeJ小鼠出现早发性肺炎窘迫,C57BL/6J小鼠出现晚发性肺炎伴纤维化。先前的研究表明,2号染色体上28mb位点的C3H/HeJ等位基因与早期发病窘迫有关,17号染色体上18mb位点的C3H/HeJ等位基因(称为Radpf1,用于辐射诱导的肺纤维化-1)与全胸辐照小鼠的纤维化减少有关。为了潜在地减少这些基因组间隔,亲代C3H/HeJ等位基因为0.71 Mb的chr17-亚基因小鼠,C3H/HeJ等位基因为95 - 123 Mb的chr - 2-基因小鼠,以及4个亚基因小鼠接受16 Gy全胸照射,并评估呼吸窘迫和窘迫时组织学肺部疾病的发病情况。受辐射的C3H/HeJ和C57BL/6J小鼠分别100%表现出肺炎和肺炎伴纤维化的呼吸窘迫(肺的6.8%),而18/19 chr17亚基因小鼠存活至治疗后25周,无窘迫症状,辐射诱导的肺纤维化明显减少(肺的0.3%,P = 0.002)。在chr2亚基因中,我们称之为Pneum1(肺炎1)的一种小鼠在放射后平均在雌性20.2±1.1周死亡,在雄性26.3±1.2周死亡(与同源小鼠相比P为0.22),将该位点减少到5.6 Mb。生物信息学分析显示,在这些缩短的时间间隔内,有114个候选基因对包括免疫途径在内的途径产生影响。绘制小鼠辐射诱发肺部疾病的精细遗传易感性图。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Radiation research
Radiation research 医学-核医学
CiteScore
5.10
自引率
8.80%
发文量
179
审稿时长
1 months
期刊介绍: Radiation Research publishes original articles dealing with radiation effects and related subjects in the areas of physics, chemistry, biology and medicine, including epidemiology and translational research. The term radiation is used in its broadest sense and includes specifically ionizing radiation and ultraviolet, visible and infrared light as well as microwaves, ultrasound and heat. Effects may be physical, chemical or biological. Related subjects include (but are not limited to) dosimetry methods and instrumentation, isotope techniques and studies with chemical agents contributing to the understanding of radiation effects.
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