{"title":"Functional resonator-based nonlocal FGP hollow adsorber for wide detection of coupled biomolecules using DQM framework","authors":"Mohamed Mektout, Hicham Bourouina, Yahia Maiza, Soumia Khouni, Abir Lamari, Brahim Said Djellali, Lamine Elaihar","doi":"10.1007/s11012-025-02025-y","DOIUrl":null,"url":null,"abstract":"<div><p>This study examines the resonance frequency shift due to adsorption in a biomolecule-resonator sandwich nanobeam system under a temperature-induced load. The analysis incorporates shear deformation, distributed adatoms, and small-scale effects within the framework of nonlocal elasticity theory (NET). The sandwich nanobeam consists of three sections: a perforated core with a uniform square-hole pattern and two bonded functionally graded porous (FGP) layers. Adsorption-induced energy is modeled using a distribution-based approach for spike proteins and bio-receptors. The dynamic model of the nanobeam resonator integrates surface stress effects. The functional nanobeam and localized biomolecule models are used in conjunction with van der Waals (vdW) forces, employing the Lennard–Jones (6–12) and Morse potentials to assess all influencing factors. Shear force and inertia moment are explicitly derived from the nonlocal Timoshenko beam equations, with residual stress considered as an additional axial load. The Navier technique and differential quadrature method (DQM) are employed to solve the motion equations, enabling a comprehensive interpretation of the results. Numerical findings reveal that surface properties, adsorbed adatoms, perforation dimensions, hole number, thermal loads, variation in power law index, porosity parameters, and the positioning of receptors and spikes all influence the frequency shift. Results further indicate that interatomic interactions reduce system stiffness, emphasizing their significance in computational analysis. The proposed model effectively evaluates the dynamic response of biomolecule-resonators and can determine the mass and density of viruses and spikes while accounting for adatom bonding effects.</p></div>","PeriodicalId":695,"journal":{"name":"Meccanica","volume":"60 9","pages":"2779 - 2813"},"PeriodicalIF":2.1000,"publicationDate":"2025-07-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Meccanica","FirstCategoryId":"5","ListUrlMain":"https://link.springer.com/article/10.1007/s11012-025-02025-y","RegionNum":3,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"MECHANICS","Score":null,"Total":0}
引用次数: 0
Abstract
This study examines the resonance frequency shift due to adsorption in a biomolecule-resonator sandwich nanobeam system under a temperature-induced load. The analysis incorporates shear deformation, distributed adatoms, and small-scale effects within the framework of nonlocal elasticity theory (NET). The sandwich nanobeam consists of three sections: a perforated core with a uniform square-hole pattern and two bonded functionally graded porous (FGP) layers. Adsorption-induced energy is modeled using a distribution-based approach for spike proteins and bio-receptors. The dynamic model of the nanobeam resonator integrates surface stress effects. The functional nanobeam and localized biomolecule models are used in conjunction with van der Waals (vdW) forces, employing the Lennard–Jones (6–12) and Morse potentials to assess all influencing factors. Shear force and inertia moment are explicitly derived from the nonlocal Timoshenko beam equations, with residual stress considered as an additional axial load. The Navier technique and differential quadrature method (DQM) are employed to solve the motion equations, enabling a comprehensive interpretation of the results. Numerical findings reveal that surface properties, adsorbed adatoms, perforation dimensions, hole number, thermal loads, variation in power law index, porosity parameters, and the positioning of receptors and spikes all influence the frequency shift. Results further indicate that interatomic interactions reduce system stiffness, emphasizing their significance in computational analysis. The proposed model effectively evaluates the dynamic response of biomolecule-resonators and can determine the mass and density of viruses and spikes while accounting for adatom bonding effects.
期刊介绍:
Meccanica focuses on the methodological framework shared by mechanical scientists when addressing theoretical or applied problems. Original papers address various aspects of mechanical and mathematical modeling, of solution, as well as of analysis of system behavior. The journal explores fundamental and applications issues in established areas of mechanics research as well as in emerging fields; contemporary research on general mechanics, solid and structural mechanics, fluid mechanics, and mechanics of machines; interdisciplinary fields between mechanics and other mathematical and engineering sciences; interaction of mechanics with dynamical systems, advanced materials, control and computation; electromechanics; biomechanics.
Articles include full length papers; topical overviews; brief notes; discussions and comments on published papers; book reviews; and an international calendar of conferences.
Meccanica, the official journal of the Italian Association of Theoretical and Applied Mechanics, was established in 1966.