Identifying the role of aging-related genes in intracranial aneurysms through bioinformatics analysis.

Q2 Medicine
Junlin Kang, Shilai Tian, Xiaofeng Xu, Gang Yang
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引用次数: 0

Abstract

Background: Intracranial aneurysm(IA) are among the most common cerebrovascular diseases, and their rupture can lead to severe consequences. Aging plays a significant role in the onset and progression of many diseases, yet it remains understudied in the context of intracranial aneurysms. The aim of this study is to investigate the role of aging-related genes in the development of intracranial aneurysms using public databases, in order to understand the underlying biological mechanisms.  METHODS: Gene expression profiles for intracranial aneurysms were downloaded from the GEO database. Human aging-related genes were obtained from the HAGR website. Differentially expressed gene analysis and WGCNA were used to identify core hub genes. GO and KEGG enrichment analyses were conducted to determine the potential biological functions and pathways that these differentially expressed aging-related genes in intracranial aneurysms might be involved in. Based on the hub genes, co-expression gene networks and Gene-TF-miRNA regulatory networks were constructed. Further exploration of drug-gene interactions was conducted to screen potential target drugs.

Results: Through the intersection of aging-related genes and differentially expressed genes in IA, 32 common differentially expressed genes were identified, with 20 genes upregulated and 12 genes downregulated. GO enrichment analysis showed that these genes were mainly involved in epithelial cell proliferation and regulation, peptide enzyme activity modulation, and metabolic Homeostasis. KEGG enrichment analysis showed that these genes were primarily involved in the adipocytokine signaling pathway, growth Hormone synthesis,secretion and action, neurotrophin signaling pathway, and longevity regulating pathway. WGCNA was used to identify genes highly correlated with the IA phenotype, and an intersection with the 32 differentially expressed aging-related genes yielded 11 candidate Hub DEARGs. The expression of the candidate Hub DEARGs was validated using an external dataset, ultimately confirming 4 hub DEARGs related to intracranial aneurysms. Among them, NGFR and ADCY5 were downregulated, while BUB1B and SERPINE1 were upregulated.  CONCLUSIONS: This study identified four aging-related genes, NGFR, ADCY5, SERPINE1, and BUB1B, that are associated with intracranial aneurysms. This provides new insights into the molecular mechanisms underlying the development of intracranial aneurysms. The identified core genes provide promising leads for further experimental research to explore the pathogenesis of the disease.

通过生物信息学分析确定老化相关基因在颅内动脉瘤中的作用。
背景:颅内动脉瘤(IA)是最常见的脑血管疾病之一,其破裂可导致严重后果。衰老在许多疾病的发生和发展中起着重要作用,但在颅内动脉瘤的背景下,它仍未得到充分的研究。本研究的目的是利用公共数据库研究衰老相关基因在颅内动脉瘤发生中的作用,以了解其潜在的生物学机制。方法:从GEO数据库下载颅内动脉瘤基因表达谱。人类衰老相关基因从HAGR网站获得。采用差异表达基因分析和WGCNA技术鉴定核心枢纽基因。我们进行GO和KEGG富集分析,以确定这些差异表达的老化相关基因在颅内动脉瘤中可能参与的潜在生物学功能和途径。以枢纽基因为基础,构建共表达基因网络和基因- tf - mirna调控网络。进一步探索药物-基因相互作用,筛选潜在的靶标药物。结果:通过IA中衰老相关基因与差异表达基因的交叉,鉴定出32个常见的差异表达基因,其中上调基因20个,下调基因12个。氧化石墨烯富集分析表明,这些基因主要参与上皮细胞的增殖和调控、肽酶活性调节和代谢稳态。KEGG富集分析表明,这些基因主要参与脂肪细胞因子信号通路、生长激素合成、分泌和作用、神经营养因子信号通路和寿命调节通路。WGCNA用于鉴定与IA表型高度相关的基因,并与32个差异表达的衰老相关基因交叉产生11个候选Hub DEARGs。使用外部数据集验证候选Hub DEARGs的表达,最终确认了4个与颅内动脉瘤相关的Hub DEARGs。其中NGFR和ADCY5下调,BUB1B和SERPINE1上调。结论:本研究确定了4个与衰老相关的基因NGFR、ADCY5、SERPINE1和BUB1B与颅内动脉瘤相关。这为颅内动脉瘤发生的分子机制提供了新的见解。鉴定的核心基因为进一步的实验研究探索疾病的发病机制提供了有希望的线索。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
2.70
自引率
0.00%
发文量
224
审稿时长
10 weeks
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