[Biblio-informatic analysis of allergens contained in the milpa diet].

Gandhi Fernando Pavón-Romero, Regina Manzanilla-Bello, Daniela Galindo-Castañeda, Ximena Cabrera-González, Josaphat Miguel Montero, Fernando Ramírez-Juárez, Luis Manuel Terán-Juárez
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Abstract

Introdution: The milpa diet (MD) is a balanced and accessible nutritional model based on the biodiversity of Mexico. Currently, research on allergens involved in food allergy (FA) has focused on foods with high global consumption, without analyzing foods included in MD.

Objective: To describe the allergens contained in MD.

Methods: A specific search was performed using the PUBMED-NCBIwebsite for MD and their respective allergens implicated in FA. Of the articles identified, those that had at least one allergen reported in the WHO/IUISsoftware were evaluated, as well as their UniProt code, necessary to access protein sequencing by BLAST software. We then conducted identification analysis using the AllerCatPro 2.0 software, setting a threshold of above 60% correlation of identity among proteins included in MD.

Results: Only 11 (16.9%) MD foods have reported associations with FA (pineapple, chili pepper, tomato, amaranth, sapodilla, peanut, avocado, squash, corn, green beans, and papaya). Likewise, 19 protein families were associated; profilins and nsLTP1 were the most frequent, presented in four and six foods, respectively. Five proteins (PR-10, TLP, cyclophilin, class IV chitinase, and nsLTP2) were identified in two foods, while twelve proteins (oleosins, conglutins, defensins, polygalacturonase, cupin, chymopapain, bromelain, L-ascorbate oxidase, 11S and 2S globulins, beta-fructofuranosidase, and ole-1-like protein) were identified in at least one food. The highest identity was found between profilins from chili pepper (cap*a*2.0201) and tomato (Sola*l*1.0101) at 94.7%.

Conlusion: Among 1080 molecules implicated in allergic responses, the bioinformatic analysis identified only ~5% in MD. However, in vitro confirmation of these findings is necessary. Foods in the MD contain a higher proportion of nsLTP1 and profilins.

[密尔巴饮食中过敏原的文献信息学分析]。
米尔帕饮食(MD)是一种基于墨西哥生物多样性的均衡、可及的营养模式。目前,对食物过敏(food allergy, FA)相关过敏原的研究主要集中在全球消费较高的食物上,未对食物过敏中包含的食物进行分析。目的:描述食物过敏中包含的过敏原。方法:使用pubmed - ncbi.com对食物过敏及其与食物过敏相关的过敏原进行特异性搜索。在鉴定的文章中,对那些在WHO/ iuiis软件中至少报告了一种过敏原的文章及其UniProt代码进行了评估,这是使用BLAST软件进行蛋白质测序所必需的。然后,我们使用AllerCatPro 2.0软件进行了鉴定分析,在MD中包含的蛋白质之间设置了超过60%的相关性阈值。结果:只有11种(16.9%)MD食品报告了与FA的关联(菠萝、辣椒、番茄、苋菜、仙人掌、花生、鳄梨、南瓜、玉米、青豆和木瓜)。同样,有19个蛋白质家族相关;profilins和nsLTP1是最常见的,分别出现在4种和6种食物中。在两种食品中鉴定出5种蛋白质(PR-10、TLP、亲环蛋白、IV类几丁质酶和nsLTP2),在至少一种食品中鉴定出12种蛋白质(油蛋白、粘连蛋白、防御蛋白、聚半乳糖醛酸酶、铜蛋白酶、乳清蛋白、菠萝蛋白酶、l -抗坏血酸氧化酶、11S和2S球蛋白、β -果糖糠醛苷酶和ol1样蛋白)。辣椒(cap*a*2.0201)和番茄(Sola*l*1.0101)的同源性最高,为94.7%。结论:在1080个与过敏反应相关的分子中,生物信息学分析仅鉴定出~5%与MD有关。然而,这些发现还需要体外验证。MD的食物中含有较高比例的nsLTP1和谱。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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