Molecular characterization and resistance mechanisms of linezolid-resistant enterococci clinical isolates and identification of a clinical Enterococcus faecium strain co-harboring optrA, poxtA, and cfr(D) in a tertiary hospital in China.

IF 3.2 3区 医学 Q2 INFECTIOUS DISEASES
Ni Suo, Jing Yu, Haijun Li, Nan Yi, Cailin Liu, Wanhai Wang
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引用次数: 0

Abstract

Objectives: The emergence of linezolid-resistant enterococci has become a significant global health concern. This study aimed to investigate the molecular characterization and resistance mechanisms in clinical isolates in a tertiary hospital in China.

Methods: The VITEK®2 Compact system, VITEK® MS, and whole-genome sequencing (WGS) were used to identify 59 linezolid-resistant enterococci isolates. Antimicrobial susceptibilities were assessed by broth microdilution. WGS and bioinformatics tools analyzed resistance mechanisms and molecular characteristics. Plasmid-borne linezolid resistance gene transfer was assessed via conjugation and transformation assays.

Results: We collected 59 linezolid-resistant enterococci isolates, including 54 Enterococcus faecalis and 5 Enterococcus faecium strains. One strain carried the poxtA gene, one isolate carried the G2576T mutation in the 23S rRNA gene, and 56 isolates harbored the optrA gene. Notably, one isolate co-harbored the optrA, poxtA, and cfr(D) genes. Twenty-three sequence types (STs) were identified. ST16 (48.1%, 26/54) predominated in E. faecalis. Multilocus sequence typing (MLST) and evolutionary analysis indicated that E. faecalis strains of the same ST were genetically related. Among the seven strains (two E. faecium and five E. faecalis strains) selected for further investigation, IS1216E was detected on plasmids carrying linezolid resistance genes in all five strains. Additionally, transposon Tn554 was detected on the chromosome of an optrA-carrying strain.

Conclusion: This study describes the molecular characteristics and resistance mechanisms of linezolid-resistant enterococci in our hospital, including a novel E. faecium isolate with optrA, poxtA, and cfr(D), highlighting the need for enhanced surveillance to control the dissemination of resistant strains.

国内某三级医院耐利奈唑胺肠球菌临床分离株的分子特征和耐药机制及一株共携带optrA、poxtA和cfr(D)的屎肠球菌临床菌株的鉴定
目的:耐利奈唑胺肠球菌的出现已成为一个重大的全球卫生问题。本研究旨在了解国内某三级医院临床分离株的分子特征及耐药机制。方法:采用VITEK®2 Compact系统、VITEK®MS和全基因组测序(WGS)对59株耐利奈唑胺肠球菌进行鉴定。采用微量肉汤稀释法测定其抗菌敏感性。WGS和生物信息学工具分析了耐药机制和分子特征。通过偶联和转化试验评估质粒携带的利奈唑胺抗性基因转移。结果:共收集到耐利奈唑胺肠球菌59株,其中粪肠球菌54株,粪肠球菌5株。1株携带poxtA基因,1株携带23S rRNA基因G2576T突变,56株携带optrA基因。值得注意的是,一个分离物同时携带optrA、poxtA和cfr(D)基因。共鉴定出23种序列类型。粪伊蚊中以ST16型为主(48.1%,26/54)。多位点序列分型(MLST)和进化分析表明,同一株粪肠球菌具有遗传亲缘关系。在选择的7株菌株(2株粪肠杆菌和5株粪肠杆菌)中,5株菌株携带利奈唑胺耐药基因的质粒上均检测到IS1216E。此外,在携带optra的菌株的染色体上检测到转座子Tn554。结论:本研究描述了我院耐利奈唑胺肠球菌的分子特征和耐药机制,包括一株含有optrA、poxtA和cfr(D)的新型屎肠球菌,强调需要加强监测以控制耐药菌株的传播。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Journal of global antimicrobial resistance
Journal of global antimicrobial resistance INFECTIOUS DISEASES-PHARMACOLOGY & PHARMACY
CiteScore
8.70
自引率
2.20%
发文量
285
审稿时长
34 weeks
期刊介绍: The Journal of Global Antimicrobial Resistance (JGAR) is a quarterly online journal run by an international Editorial Board that focuses on the global spread of antibiotic-resistant microbes. JGAR is a dedicated journal for all professionals working in research, health care, the environment and animal infection control, aiming to track the resistance threat worldwide and provides a single voice devoted to antimicrobial resistance (AMR). Featuring peer-reviewed and up to date research articles, reviews, short notes and hot topics JGAR covers the key topics related to antibacterial, antiviral, antifungal and antiparasitic resistance.
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