Machine Learning Algorithms for Adverse Drug Reactions Prediction and Identifying Its Determinants Among HIV Patients on Antiretroviral Therapy in the University of Gondar Comprehensive and Specialized Hospital, in Amhara Region, Ethiopia

IF 2.1 Q2 MEDICINE, GENERAL & INTERNAL
Mequanente Dagnaw, Addis Belayneh
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引用次数: 0

Abstract

Background

Harmful and unexpected reactions to drugs given at standard dosages using the appropriate administration technique for the goals of therapy, diagnosis, or prevention are known as adverse drug reactions (ADRs). Every medicine has the potential to produce both favorable and unfavorable outcomes. Information regarding the timing of adverse drug reactions and their predictors in adults is not well addressed regarding time and various predictor variables, including the study area, even though three separate studies on the adverse drug reactions of adult patients receiving antiretroviral therapy (ART) have been conducted in Ethiopia.

Objective

To predict adverse drug reactions in HIV patients receiving antiretroviral medication in the University of Gondar Comprehensive and Specialized Hospital using machine learning algorithms.

Methods

Using institution-based secondary data, patients receiving antiretroviral medication at the University of Gondar Comprehensive and Specialized Hospital between January 11, 2018, and January 10, 2023, were examined. Patient data was extracted from the electronic database using a methodical checklist, and it was then imported into Python version three for pre-processing and analysis. Then, seven machine learning algorithms for supervised classification were trained to create models. The prediction models were evaluated using F1-score, AUC, accuracy, sensitivity, specificity, and precision. Association rule mining was used to determine the best rule for the association between independent features and the target feature.

Result

There were 3371 (64.04%) female participants and 1893 (35.06%) male individuals out of 5864 research participants. Among all the chosen classifiers, the random forest classifier (sensitivity = 1.00, precision = 0.987, f1-score = 0.993, AUC = 0.9989) fared better in predicting ADRs. Based on the importance ranking, the CD4 count was determined to be the most significant predictor feature. The top eight predictors of ADRs were identified by random forest feature importance and association rules as follows: Male, younger age, longer duration on ART, not taking Co-trimoxazole preventive therapy (CPT), not taking TB (Tuberculosis) preventive therapy (TPT), secondary educational status, TDF-3TC-EFV, and low CD4 counts.

Conclusion

Our research shows that HIV patients who are at a high risk of adverse drug reactions and those who can recognize the predictive traits associated with the ADRs can be categorized according to how effectively their ART treatment is working. However, our research may help address the pressing public health issue of diagnosing and treating HIV-positive individuals.

Abstract Image

机器学习算法预测药物不良反应并识别抗逆转录病毒治疗艾滋病患者的决定因素在埃塞俄比亚阿姆哈拉地区的贡达尔大学综合专科医院。
背景:为了达到治疗、诊断或预防的目的,使用适当的给药技术,以标准剂量给药时产生的有害和意外反应被称为药物不良反应(adr)。每种药物都有可能产生有利和不利的结果。尽管埃塞俄比亚已经开展了三项关于接受抗逆转录病毒治疗(ART)的成人患者药物不良反应的独立研究,但关于成人药物不良反应发生时间及其预测因素的信息并没有很好地涉及时间和各种预测变量,包括研究区域。目的:利用机器学习算法预测贡达尔大学综合专科医院接受抗逆转录病毒药物治疗的HIV患者的药物不良反应。方法:使用基于机构的二级数据,对2018年1月11日至2023年1月10日在贡达尔大学综合专科医院接受抗逆转录病毒药物治疗的患者进行检查。使用有条理的检查表从电子数据库中提取患者数据,然后将其导入Python版本3进行预处理和分析。然后,训练7种用于监督分类的机器学习算法来创建模型。采用f1评分、AUC、准确性、敏感性、特异性和精密度对预测模型进行评价。关联规则挖掘用于确定独立特征与目标特征之间关联的最佳规则。结果:5864名研究对象中,女性3371人(64.04%),男性1893人(35.06%)。在所有选择的分类器中,随机森林分类器(灵敏度= 1.00,精度= 0.987,f1-score = 0.993, AUC = 0.9989)对adr的预测效果更好。根据重要性排序,CD4计数被确定为最显著的预测特征。随机森林特征重要性和关联规则确定了adr的前8个预测因素:男性、年龄较小、抗逆转录病毒治疗持续时间较长、未服用复方新诺明预防治疗(CPT)、未服用结核病(TB)预防治疗(TPT)、中等教育程度、TDF-3TC-EFV和低CD4计数。结论:我们的研究表明,可以根据ART治疗的效果对药物不良反应高风险的HIV患者和能够识别与adr相关的预测特征的患者进行分类。然而,我们的研究可能有助于解决诊断和治疗艾滋病毒阳性个体的紧迫公共卫生问题。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Health Science Reports
Health Science Reports Medicine-Medicine (all)
CiteScore
1.80
自引率
0.00%
发文量
458
审稿时长
20 weeks
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