Uncovering a fibroblast differentiation-based keloid classification by integration of single-cell and bulk RNA sequencing.

IF 5.1 1区 生物学 Q1 BIOLOGY
Wei Zhang, Jianyu Lu, Xirui Tong, Sujie Xie, Shuyuan Xian, Yifan Liu, Jiale Yan, Weijin Qian, Hanlin Sun, Yushu Zhu, Luofeng Jiang, Xinya Guo, Xinran Ding, Yixu Li, Chenguang Bai, Runzhi Huang, Zhaofan Xia, Shizhao Ji
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引用次数: 0

Abstract

Keloids are dermal fibroproliferative skin disorders caused by abnormal wound healing, resulting in impaired skin function and aesthetic defects. Abnormal fibroblast proliferation and excessive collagen deposition are involved in keloid formation. This study investigated the role of fibroblast differentiation in keloid development. Single-cell and bulk RNA sequencing data of keloids were comprehensively analyzed, and 25 clinically relevant differentially expressed fibroblast-differentiation-related genes (DEFDRGs) were identified. Based on DEFDRGs, a keloid diagnostic classification system comprising three subtypes was constructed, indicating that DEFDRGs could serve as therapeutic targets. Additionally, multiple microarray datasets, protein sequencing data, and immunohistochemical analyses of key markers in clinical keloid samples were used for further verification. In conclusion, this study established a molecular classification of keloids based on fibroblast differentiation, contributing to the further understanding of keloid pathogenesis and providing new insights for diagnosis and treatment.

通过整合单细胞和大量RNA测序,揭示基于成纤维细胞分化的瘢痕疙瘩分类。
瘢痕疙瘩是由于创面愈合异常引起的真皮纤维增生性皮肤疾病,导致皮肤功能受损和审美缺陷。瘢痕疙瘩的形成与成纤维细胞增生异常和胶原沉积过多有关。本研究探讨了成纤维细胞分化在瘢痕疙瘩发育中的作用。综合分析瘢痕疙瘩单细胞和大块RNA测序数据,鉴定出25个临床相关的差异表达成纤维细胞分化相关基因(DEFDRGs)。基于DEFDRGs构建了包含3个亚型的瘢痕疙瘩诊断分类体系,表明DEFDRGs可作为治疗靶点。此外,使用多个微阵列数据集,蛋白质测序数据和临床瘢痕疙瘩样本中关键标记物的免疫组织化学分析进行进一步验证。总之,本研究基于成纤维细胞分化建立了瘢痕疙瘩的分子分类,有助于进一步了解瘢痕疙瘩的发病机制,为诊断和治疗提供新的见解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Communications Biology
Communications Biology Medicine-Medicine (miscellaneous)
CiteScore
8.60
自引率
1.70%
发文量
1233
审稿时长
13 weeks
期刊介绍: Communications Biology is an open access journal from Nature Research publishing high-quality research, reviews and commentary in all areas of the biological sciences. Research papers published by the journal represent significant advances bringing new biological insight to a specialized area of research.
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