Identifying Causal Inflammatory Factors With Gene Mediators and Potential Drugs for Bronchiectasis

Wanzhe Liao, Haobin Zhou, Zhuofeng Wen, Weixuan Liang, Chongde Pan, Zhiyi Zhou, Jingzhang Sun, Chang Liu, Xiangdong Zhou, Naijun Yuan, Qi Li, Chuiguo Huang
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Abstract

Background

Bronchiectasis is a chronic respiratory disease characterized by irreversible dilation of the bronchi. Despite advancements in diagnostic techniques and therapeutic strategies, the underlying etiological factors driving bronchiectasis pathogenesis remain unclear. The purpose of this study was to explore the potential causal relationship between inflammatory factors and bronchiectasis to better understand the disease's molecular mechanisms and identify possible therapeutic targets.

Methods

Genome-wide data were utilized to conduct two-sample Mendelian randomization (MR) focusing on the causal relationships between 41 inflammatory factors and bronchiectasis. The reliability of the results was validated by sensitivity tests. Summary data-based MR, coloc, and intermediary MR were utilized to determine latent upstream genes and estimate indirect effects. Molecular docking was applied to identify existing effective drugs.

Results

Four inflammatory factors with potential causal effects on bronchiectasis were identified: macrophage migration inhibitory factor, interleukin-4, interferon-gamma (IFN-γ), and basic fibroblast growth factor (bFGF). Additional sensitivity tests tended to support the directional consistency of the IFN-γ and bFGF estimates. RP11-589P10.5 reduced the risk of bronchiectasis mediated by the IFN-γ concentration. Metronidazole, ibuprofen, methotrexate, pioglitazone, and ciprofloxacin were identified as effective therapeutic drugs, whereas simvastatin was predicted to be harmful. Ciprofloxacin and lansoprazole were also identified as potentially therapeutic and harmful drugs with the strongest binding activities, respectively.

Conclusions

This study provides strong evidence for the causal effects of macrophage migration inhibitory factor, interleukin-4, IFN-γ and bFGF in bronchiectasis, especially the latter two inflammatory factors. RP11-589P10.5 latently decreased the risk of bronchiectasis mediated by IFN-γ. Methotrexate, lansoprazole, and pioglitazone were predicted to have potential therapeutic values.

Abstract Image

用基因介质和潜在药物鉴定支气管扩张的炎性因子
背景:支气管扩张是一种慢性呼吸系统疾病,其特征是支气管不可逆扩张。尽管在诊断技术和治疗策略的进步,潜在的病因学因素驱动支气管扩张的发病机制仍不清楚。本研究的目的是探讨炎症因子与支气管扩张之间的潜在因果关系,以更好地了解疾病的分子机制并确定可能的治疗靶点。方法利用全基因组数据进行双样本孟德尔随机化(MR),重点研究41种炎症因子与支气管扩张之间的因果关系。通过敏感性试验验证了结果的可靠性。利用基于汇总数据的MR、coloc和中间MR来确定潜在的上游基因并估计间接影响。应用分子对接技术鉴定现有有效药物。结果鉴定出巨噬细胞迁移抑制因子、白细胞介素-4、干扰素-γ (IFN-γ)和碱性成纤维细胞生长因子(bFGF) 4种可能导致支气管扩张的炎症因子。额外的敏感性测试倾向于支持IFN-γ和bFGF估计值的方向一致性。RP11-589P10.5降低IFN-γ浓度介导的支气管扩张风险。甲硝唑、布洛芬、甲氨喋呤、吡格列酮和环丙沙星被认为是有效的治疗药物,而辛伐他汀被认为是有害的。环丙沙星和兰索拉唑也分别被鉴定为具有最强结合活性的潜在治疗药物和有害药物。结论本研究为巨噬细胞迁移抑制因子、白细胞介素-4、IFN-γ和bFGF在支气管扩张中的因果作用提供了有力证据,尤其是后两种炎症因子。RP11-589P10.5可潜在降低IFN-γ介导的支气管扩张的风险。预计甲氨蝶呤、兰索拉唑和吡格列酮具有潜在的治疗价值。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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