Molecular characterization of four novel mycoviruses in entomopathogenic and nematophagous fungi.

IF 4 3区 医学 Q2 VIROLOGY
Kang Zhou, Shuang Wu, Yunhui He, Rui Zhou, Wen Zhang, Can Xu, Zhimin Tang
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引用次数: 0

Abstract

Background: Research on fungal viruses has predominantly focused on phytopathogenic fungi, with some studies elucidating their roles in modulating fungal virulence and influencing plant-fungus interactions. In contrast, mycoviruses harbored by entomopathogenic and nematophagous fungi have received significantly less attention.

Methods: Eleven transcriptome datasets were de novo assembled and annotated using Diamond against the NCBI non-redundant protein database. Viral sequences, potential open reading frames (ORFs), and deduced amino acid sequences were analyzed using DNAMAN. Phylogenetic analysis was conducted based on the amino acid sequences.

Results: This study characterized four mycoviruses from Hirsutella satumaensis, Ophiocordyceps sinensis, and Orbilia oligospora. Based on BLASTp analysis, the amino acid sequences of these viral genomes showed 50% to 98% identity to those of known viruses. Detailed sequence analysis revealed that Hirsutella satumaensis botourmiavirus 1 (HsBV1), Ophiocordyceps sinensis mitovirus 4 (OsMV4), Orbilia oligospora negative-strand RNA virus 1 (OoNSV1), and Orbilia oligospora narnavirus 1 (OoNV1) contained nearly complete genomes. Each virus featured a single open reading frame (ORF) encoding a putative RNA-dependent RNA polymerase (RdRp) with a conserved GDD motif. Additionally, their variable 3' untranslated regions (3'-UTRs) and 5'-UTRs were predicted to form stable stem-loop secondary structures, which may play roles in viral replication or stability. Phylogenetic analysis indicated that these mycoviruses belong to the families Aspiviridae, Botourmiaviridae, Mitoviridae, and Narnaviridae.

Conclusions: These findings expand our understanding of mycoviral diversity in nematophagous and entomopathogenic fungi. Further research is needed to explore whether these mycoviruses influence fungal interactions with insects or nematodes, which may uncover novel ecological and functional roles.

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昆虫病原真菌和噬线虫真菌中四种新型分枝病毒的分子特征。
背景:真菌病毒的研究主要集中在植物病原真菌上,一些研究阐明了它们在调节真菌毒力和影响植物与真菌相互作用中的作用。相比之下,由昆虫病原真菌和噬线虫真菌所携带的分枝病毒受到的关注要少得多。方法:利用Diamond对NCBI非冗余蛋白数据库重新组装11个转录组数据集并进行注释。利用DNAMAN分析病毒序列、潜在开放阅读框(orf)和推断的氨基酸序列。根据氨基酸序列进行系统发育分析。结果:本研究鉴定了四种来自红毛藻、虫草和小孢子虫草的分枝病毒。基于BLASTp分析,这些病毒基因组的氨基酸序列与已知病毒的同源性为50% ~ 98%。详细的序列分析表明,红毛杆菌肉毒杆菌病毒1型(HsBV1)、虫草有丝分裂病毒4型(OsMV4)、少孢子虫负链RNA病毒1型(OoNSV1)和少孢子虫narnava病毒1型(OoNV1)的基因组接近完整。每种病毒都有一个单独的开放阅读框(ORF),编码一个假定的RNA依赖性RNA聚合酶(RdRp),具有保守的GDD基序。此外,它们的可变3‘非翻译区(3’-UTRs)和5'-UTRs被预测形成稳定的茎环二级结构,这可能在病毒复制或稳定性中发挥作用。系统发育分析表明,这些分枝病毒属于阿斯匹病毒科、肉毒杆菌病毒科、有丝分裂病毒科和纳纳病毒科。结论:这些发现扩大了我们对噬线虫真菌和昆虫病原真菌中分枝病毒多样性的认识。需要进一步研究这些分枝病毒是否影响真菌与昆虫或线虫的相互作用,这可能会揭示新的生态和功能作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Virology Journal
Virology Journal 医学-病毒学
CiteScore
7.40
自引率
2.10%
发文量
186
审稿时长
1 months
期刊介绍: Virology Journal is an open access, peer reviewed journal that considers articles on all aspects of virology, including research on the viruses of animals, plants and microbes. The journal welcomes basic research as well as pre-clinical and clinical studies of novel diagnostic tools, vaccines and anti-viral therapies. The Editorial policy of Virology Journal is to publish all research which is assessed by peer reviewers to be a coherent and sound addition to the scientific literature, and puts less emphasis on interest levels or perceived impact.
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