The Toxicity of Microplastics Explorer (ToMEx) 2.0.

Microplastics and nanoplastics Pub Date : 2025-01-01 Epub Date: 2025-09-26 DOI:10.1186/s43591-025-00145-6
Leah M Thornton Hampton, Dana Briggs Wyler, Bethanie Carney Almroth, Scott Coffin, Win Cowger, Darragh Doyle, Eden K Hataley, Sara J Hutton, Magdalena M Mair, Ezra L Miller, Laura Monclús, Emma E Sharpe, Siddiqui Samreen, Kazi Towsif Ahmed, Quinn P V Allamby, Ana L Antonio Vital, Davide Asnicar, Jennifer L Bare, Andrew Barrick, Katherine Berreman, Lidwina Bertrand, Virginia Boone, Agathe Bour, Julian Brehm, Victor Carrasco-Navarro, Travis Cook, Garth A Covernton, Patricia Cubanski, Pedro M C Da Silva, Luan de Souza Leite, Sam M Gene, Ludovic Hermabessiere, Asta Hooge, Yuichi Iwasaki, Natasha Klasios, Christine M Knauss, Azora König Kardgar, Philipp Kropf, Isaac B Kudu, Anna Kukkola, Christian Laforsch, Stephanie B Kennedy, Frederic D L Leusch, Lucy Wei Li, Hsuan-Cheng Lu, Judd Mahan, Uddin Md Saif, Simona Mondellini, John P Norman, Zacharias Pandelides, Tove Petersson, Danielle A Philibert, Elina Kvist, Anja F R M Ramsperger, Gabrielle Rigutto, Sven Ritschar, Monica H Sandgaard, Jona Schmitt, Matthias Schott, Michael Schwarzer, Katryna J Seabrook, Teresa M Seifried, Rohan Sepahi, Mariella Siña, Alex N Testoff, Maaike Vercauteren, Colleen M Wardlaw, Andrew Yeh, Rachel Zajac-Fay, Alvine C Mehinto
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引用次数: 0

Abstract

In 2021 the Toxicity of Microplastics Explorer (ToMEx, https://microplastics.sccwrp.org) was released as an open source, open access database and web application for microplastics toxicity. Since then, it has been utilized by the microplastic research community for the exploration, visualization, and analysis of toxicity data for both hazard characterization and risk assessment. The peer-reviewed literature has continued to grow exponentially, making ToMEx out-of-date. To ensure the continued utility of ToMEx, an international crowd-sourcing approach was utilized to update ToMEx by extracting data from additional studies published since the original release. Through this process, both the aquatic and human health ToMEx databases roughly doubled in size, and modest increases in data diversity (e.g., number of species represented, types of test particles) were observed in the aquatic organisms database. However, most trends (e.g., greater toxicities observed with smaller particle sizes, lack of dose-response data etc.) observed in the first iteration of ToMEx remained constant. A previously developed framework for deriving ecological health-based microplastic thresholds using species sensitivity distributions was reapplied to determine how thresholds and their associated uncertainty intervals would change following the database update. Twelve new studies passed minimum screening criteria and were deemed fit for the purpose of threshold derivation. The addition of new data allowed for the separation of freshwater and marine compartments which had previously been combined due to a lack of applicable toxicity data for freshwater species. When molecular and cellular level endpoints were included, freshwater thresholds were comparable or increased from values calculated using previous data (-5 to 2.5-fold change) whereas marine thresholds dramatically decreased (-5000 to -29-fold change). However, when endpoints were restricted to organism and above, marine and freshwater thresholds were comparable to those calculated previously (-20 to 14-fold change). Confidence intervals for both marine and freshwater thresholds remained wide. The doubling of the database increases the value of ToMEx for researchers, particularly those focused on characterizing hazards associated with microplastics. Its utility remains limited for environmental managers as 89% of studies in ToMEx 2.0 failed to meet minimum screening criteria for threshold derivation, highlighting the need to generate fit-for-purpose toxicity data for threshold development. However, ToMEx continues to be a useful research tool, and future iterations could become even more powerful through novel artificial intelligence applications to streamline data curation and even predict toxicological outcomes.

Supplementary information: The online version contains supplementary material available at 10.1186/s43591-025-00145-6.

微塑料探索者(ToMEx) 2.0的毒性。
2021年,微塑料毒性探索者(ToMEx, https://microplastics.sccwrp.org)作为微塑料毒性的开源、开放获取数据库和web应用程序发布。从那时起,微塑料研究界就利用它来探索、可视化和分析毒性数据,以进行危害表征和风险评估。同行评议的文献继续呈指数增长,使得ToMEx过时了。为了确保ToMEx的持续效用,我们采用了一种国际众包方法,通过从原始版本发布以来发表的其他研究中提取数据来更新ToMEx。通过这一过程,水生和人类健康ToMEx数据库的规模大约增加了一倍,并且在水生生物数据库中观察到数据多样性(例如,所代表的物种数量、测试颗粒类型)略有增加。然而,在ToMEx的第一次迭代中观察到的大多数趋势(例如,更小的颗粒尺寸观察到更大的毒性,缺乏剂量-反应数据等)保持不变。重新应用先前开发的利用物种敏感性分布得出基于生态健康的微塑性阈值的框架,以确定阈值及其相关的不确定性区间在数据库更新后将如何变化。12项新研究通过了最低筛选标准,并被认为适合阈值推导的目的。新数据的增加使以前由于缺乏淡水物种的适用毒性数据而合并的淡水和海洋隔间得以分离。当包括分子和细胞水平端点时,淡水阈值与使用先前数据计算的值相当或增加(-5至2.5倍变化),而海洋阈值则急剧下降(-5000至-29倍变化)。然而,当终点仅限于生物及以上时,海洋和淡水阈值与以前计算的值相当(变化幅度为-20至14倍)。海洋和淡水阈值的置信区间仍然很宽。数据库的翻倍增加了ToMEx对研究人员的价值,特别是那些专注于描述与微塑料有关的危害的研究人员。对于环境管理者来说,它的效用仍然有限,因为在ToMEx 2.0中,89%的研究未能达到阈值推导的最低筛选标准,这突出了为阈值开发生成适合用途的毒性数据的必要性。然而,ToMEx仍然是一个有用的研究工具,未来的迭代可能会通过新的人工智能应用程序变得更加强大,以简化数据管理,甚至预测毒理学结果。补充信息:在线版本包含补充资料,下载地址:10.1186/s43591-025-00145-6。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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