In silico prediction of the binding structure between vitellogenin and vitellogenin receptor of Haemaphysalis longicornis.

IF 1.1 4区 农林科学 Q3 VETERINARY SCIENCES
Meryem Behri, Hayato Kawada, Yuki Koike, Sana Sasaki, Kofi Dadzie Kwofie, Hanako Kunisada, Takahiro Inoue, Keiko Mizutani, Kei Jimbo, Fusako Mikami, Kiyomasa Machida, Makoto Matsubayashi, Naotoshi Tsuji, Takeshi Hatta, Yasunobu Matsumoto
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引用次数: 0

Abstract

Vitellogenin (Vtg) and its receptor (VtgR)-essential for yolk deposition and transovarial pathogen transmission in ticks-are compelling targets for antibody-based intervention. To investigate their interaction in the tick Haemaphysalic longicornis, we employed AlphaFold2 to model the β-barrel domain of the midgut-synthesized paralog HlVtg1 and the first three ligand-binding repeats (LBR1-3) of HlVtgR. Subsequent protein-protein docking in Molecular Operating Environment (MOE) revealed a recurrent binding interface centered on HlVtg1's Glu87, which formed persistent electrostatic interactions with LBR1-3 across top-ranking poses. Our results support a "monomeric engagement" model, where a single HlVtg1 monomer simultaneously engages all three low-density lipoprotein receptor class-A (LDLRA) domains of HlVtgR. This mechanism contrasts with the classical dimeric model and challenges prior inferences about stoichiometry and symmetry of binding sites. The predicted contact residues defined here may serve as a useful basis for evaluating candidate epitopes for interventions aimed at disrupting oocyte maturation and transovarial transmission of pathogens in H. longicornis.

长角血蜱卵黄蛋白原与卵黄蛋白原受体结合结构的计算机预测。
卵黄原蛋白(Vtg)及其受体(VtgR)对蜱的卵黄沉积和经卵巢病原体传播至关重要,是基于抗体干预的重要靶点。为了研究它们在蜱长角血蜱中的相互作用,我们使用AlphaFold2来模拟中肠合成的平行HlVtg1的β-桶结构域和HlVtgR的前三个配体结合重复序列(LBR1-3)。随后在分子操作环境(MOE)中的蛋白对接发现了一个以HlVtg1的Glu87为中心的循环结合界面,该界面与LBR1-3形成了持续的静电相互作用。我们的研究结果支持“单体结合”模型,即单个HlVtg1单体同时结合HlVtgR的所有三个低密度脂蛋白受体a类(LDLRA)结构域。这种机制与经典的二聚体模型形成对比,挑战了先前关于结合位点的化学计量和对称性的推断。本文定义的预测接触残基可以作为评估候选表位的有用基础,用于干预旨在破坏长角天牛卵母细胞成熟和病原体经卵巢传播的干预措施。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Journal of Veterinary Medical Science
Journal of Veterinary Medical Science 农林科学-兽医学
CiteScore
2.30
自引率
8.30%
发文量
230
审稿时长
9-18 weeks
期刊介绍: JVMS is a peer-reviewed journal and publishes a variety of papers on veterinary science from basic research to applied science and clinical research. JVMS is published monthly and consists of twelve issues per year. Papers are from the areas of anatomy, physiology, pharmacology, toxicology, pathology, immunology, microbiology, virology, parasitology, internal medicine, surgery, clinical pathology, theriogenology, avian disease, public health, ethology, and laboratory animal science. Although JVMS has played a role in publishing the scientific achievements of Japanese researchers and clinicians for many years, it now also accepts papers submitted from all over the world.
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