Ferroptosis-Linked Six-Gene Panel Enables Machine Learning-Assisted Diagnosis and Therapeutic Guidance in Lung Adenocarcinoma.

IF 3.5 3区 生物学 Q1 BIOLOGY
Faris Alrumaihi
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Abstract

Lung adenocarcinoma (LUAD) remains the most common subtype of non-small-cell lung cancer and a major cause of cancer mortality, with many patients lacking actionable mutations or durable responses to targeted or immune therapies. Here, we report an integrative analysis of TCGA LUAD transcriptomes (n = 598) seeded from a curated ferroptosis gene catalogue, yielding a compact six-gene signature (AQP4, CDCA3, HJURP, KIF20A, PLK1, UHRF1) with diagnostic, prognostic, and therapeutic relevance. The signature was consistently dysregulated in tumours versus normal lung and stratified patients into high- and low-risk groups with distinct survival outcomes (log-rank p < 0.0001), outperforming conventional staging when incorporated into multivariable models. Across ten machine learning algorithms, the panel achieved near-perfect tumour-normal classification (AUC 0.99-1.00), highlighting its translational potential for early detection. Functional analyses linked the signature to cell-cycle, angiogenic, and immune modulation, while exploratory drug-gene correlations identified PLK1 and other candidates as potential therapeutic targets. Together, these findings establish a biologically anchored six-gene panel that complements existing mutation-based classifiers and provides a framework for advancing diagnostic precision, prognostic refinement, and biomarker-guided therapeutic strategies in LUAD.

肺腺癌的机器学习辅助诊断和治疗指导。
肺腺癌(LUAD)仍然是非小细胞肺癌最常见的亚型,也是癌症死亡的主要原因,许多患者缺乏可操作的突变或对靶向或免疫治疗的持久反应。在这里,我们报告了一项对TCGA LUAD转录组(n = 598)的综合分析,这些转录组来自一个精心策划的铁下垂基因目录,产生了一个紧凑的六个基因特征(AQP4、CDCA3、HJURP、KIF20A、PLK1、UHRF1),具有诊断、预后和治疗相关性。与正常肺相比,肿瘤患者的特征持续失调,并将患者分层为高风险和低风险组,具有不同的生存结果(log-rank p < 0.0001),在纳入多变量模型时优于传统分期。通过十种机器学习算法,该小组实现了近乎完美的肿瘤正常分类(AUC 0.99-1.00),突出了其早期检测的转化潜力。功能分析将标记与细胞周期,血管生成和免疫调节联系起来,而探索性药物基因相关性确定了PLK1和其他候选物作为潜在的治疗靶点。总之,这些发现建立了一个生物锚定的六基因小组,补充了现有的基于突变的分类器,并为提高LUAD的诊断精度、预后改进和生物标志物指导的治疗策略提供了一个框架。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Biology-Basel
Biology-Basel Biological Science-Biological Science
CiteScore
5.70
自引率
4.80%
发文量
1618
审稿时长
11 weeks
期刊介绍: Biology (ISSN 2079-7737) is an international, peer-reviewed, quick-refereeing open access journal of Biological Science published by MDPI online. It publishes reviews, research papers and communications in all areas of biology and at the interface of related disciplines. Our aim is to encourage scientists to publish their experimental and theoretical results in as much detail as possible. There is no restriction on the length of the papers. The full experimental details must be provided so that the results can be reproduced. Electronic files regarding the full details of the experimental procedure, if unable to be published in a normal way, can be deposited as supplementary material.
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