Deep learning-based cardiac computed tomography angiography left atrial segmentation and quantification in atrial fibrillation patients: a multi-model comparative study.

IF 2.9 4区 医学 Q3 ENGINEERING, BIOMEDICAL
Lijun Feng, Wei Lu, Jiayi Liu, Zining Chen, Junyan Jin, Ningjing Qian, Jingnan Pan, Lijuan Wang, Jianping Xiang, Jun Jiang, Yaping Wang
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Abstract

Background and purpose: Quantitative assessment of left atrial volume (LAV) is an important factor in the study of the pathogenesis of atrial fibrillation. However, automated left atrial segmentation with quantitative assessment usually faces many challenges. The main objective of this study was to find the optimal left atrial segmentation model based on cardiac computed tomography angiography (CTA) and to perform quantitative LAV measurement.

Method: A multi-center left atrial study cohort containing 182 cardiac CTAs with atrial fibrillation was created, each case accompanied by expert image annotation by a cardiologist. Then, based on this left atrium dataset, five recent states-of-the-art (SOTA) models in the field of medical image segmentation were used to train and validate the left atrium segmentation model, including DAResUNet, nnFormer, xLSTM-UNet, UNETR, and VNet, respectively. Further, the optimal segmentation model was used to assess the consistency validation of the LAV.

Results: DAResUNet achieved the best performance in DSC (0.924 ± 0.023) and JI (0.859 ± 0.065) among all models, while VNet is the best performer in HD (12.457 ± 6.831) and ASD (1.034 ± 0.178). The Bland-Altman plot demonstrated the extremely strong agreement (mean bias - 5.69 mL, 95% LoA - 19-7.6 mL) between the model's automatic prediction and manual measurements.

Conclusion: Deep learning models based on a study cohort of 182 CTA left atrial images were capable of achieving competitive results in left atrium segmentation. LAV assessment based on deep learning models may be useful for biomarkers of the onset of atrial fibrillation.

基于深度学习的心脏计算机断层血管造影在房颤患者左房分割和量化:一项多模型比较研究。
背景与目的:定量评估左房容积(LAV)是研究心房颤动发病机制的重要因素。然而,定量评估的自动左心房分割通常面临许多挑战。本研究的主要目的是寻找基于心脏计算机断层血管造影(CTA)的最佳左房分割模型,并进行定量的LAV测量。方法:建立一个多中心左房研究队列,包含182例心房颤动的心脏cta,每个病例都有心脏病专家的专家图像注释。然后,基于该左心房数据集,利用医学图像分割领域最新的5个SOTA模型(DAResUNet、nnFormer、xLSTM-UNet、UNETR和VNet)分别对左心房分割模型进行训练和验证。进一步,利用最优分割模型对LAV的一致性验证进行评估。结果:在所有模型中,DAResUNet在DSC(0.924±0.023)和JI(0.859±0.065)方面表现最佳,VNet在HD(12.457±6.831)和ASD(1.034±0.178)方面表现最佳。Bland-Altman图显示了模型的自动预测和人工测量之间非常强的一致性(平均偏差- 5.69 mL, 95% LoA - 19-7.6 mL)。结论:基于182张CTA左心房图像的深度学习模型能够在左心房分割方面取得有竞争力的结果。基于深度学习模型的LAV评估可能对房颤发作的生物标志物有用。
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来源期刊
BioMedical Engineering OnLine
BioMedical Engineering OnLine 工程技术-工程:生物医学
CiteScore
6.70
自引率
2.60%
发文量
79
审稿时长
1 months
期刊介绍: BioMedical Engineering OnLine is an open access, peer-reviewed journal that is dedicated to publishing research in all areas of biomedical engineering. BioMedical Engineering OnLine is aimed at readers and authors throughout the world, with an interest in using tools of the physical and data sciences and techniques in engineering to understand and solve problems in the biological and medical sciences. Topical areas include, but are not limited to: Bioinformatics- Bioinstrumentation- Biomechanics- Biomedical Devices & Instrumentation- Biomedical Signal Processing- Healthcare Information Systems- Human Dynamics- Neural Engineering- Rehabilitation Engineering- Biomaterials- Biomedical Imaging & Image Processing- BioMEMS and On-Chip Devices- Bio-Micro/Nano Technologies- Biomolecular Engineering- Biosensors- Cardiovascular Systems Engineering- Cellular Engineering- Clinical Engineering- Computational Biology- Drug Delivery Technologies- Modeling Methodologies- Nanomaterials and Nanotechnology in Biomedicine- Respiratory Systems Engineering- Robotics in Medicine- Systems and Synthetic Biology- Systems Biology- Telemedicine/Smartphone Applications in Medicine- Therapeutic Systems, Devices and Technologies- Tissue Engineering
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