Enhancing Melanoma Diagnosis in Histopathology with Deep Learning and Synthetic Data Augmentation.

IF 3.7 3区 医学 Q2 ENGINEERING, BIOMEDICAL
Alex Rodriguez Alonso, Ana Sanchez Diez, Goikoane Cancho Galán, Rafael Ibarrola Altuna, Gonzalo Irigoyen Miró, Cristina Penas Lago, Mª Dolores Boyano López, Rosa Izu Belloso
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引用次数: 0

Abstract

Accurate diagnosis of melanoma using hematoxylin and eosin (H&E)-stained histological images is often challenged by the scarcity and imbalance of biomedical datasets, limiting the performance of deep learning models. This study investigates the impact of synthetic image generation, via generative adversarial networks (GAN), on training automatic classifiers based on the ResNet-18 architecture. Two experimental setups were designed: one using only real images and another combining real images with synthetic ones of the melanocytic nevus class to balance the dataset. Models were trained and evaluated at resolutions up to 1024 × 1024 pixels, employing standard classification metrics and the Fréchet Inception Distance (FID) to assess the quality of the generated images. The results suggest that although mixed models do not consistently outperform those trained exclusively on real data, they achieve competitive performance, particularly in terms of specificity and reduction in false negatives. This study supports the use of synthetic data as a complementary tool in scenarios where the acquisition of new samples is limited and lays the groundwork for future research in conditional generation and synthesis of malignant samples. In our best-performing model (1024 × 1024 px, 50 epochs, mixed dataset), we achieved an accuracy of 96.00%, a specificity of 97.00%, and a reduction in false negatives from 80 to 75 cases compared with real-only training. These results highlight the potential of synthetic augmentation to improve clinically relevant outcomes, particularly in reducing missed melanoma diagnoses.

利用深度学习和合成数据增强增强组织病理学中的黑色素瘤诊断。
利用苏木精和伊红(H&E)染色的组织学图像准确诊断黑色素瘤经常受到生物医学数据集的稀缺性和不平衡性的挑战,这限制了深度学习模型的性能。本研究探讨了通过生成对抗网络(GAN)生成合成图像对基于ResNet-18架构的训练自动分类器的影响。设计了两种实验设置:一种只使用真实图像,另一种将真实图像与黑素细胞痣类的合成图像相结合,以平衡数据集。模型在最高1024 × 1024像素的分辨率下进行训练和评估,采用标准分类指标和fr起始距离(FID)来评估生成图像的质量。结果表明,尽管混合模型并不总是优于那些只训练真实数据的模型,但它们取得了具有竞争力的表现,特别是在特异性和减少假阴性方面。本研究支持在获取新样本有限的情况下使用合成数据作为补充工具,并为未来恶性样本的条件生成和合成研究奠定了基础。在我们表现最好的模型(1024 × 1024像素,50个epoch,混合数据集)中,我们实现了96.00%的准确率,97.00%的特异性,与真实训练相比,假阴性从80例减少到75例。这些结果强调了合成隆胸在改善临床相关结果方面的潜力,特别是在减少黑色素瘤漏诊方面。
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来源期刊
Bioengineering
Bioengineering Chemical Engineering-Bioengineering
CiteScore
4.00
自引率
8.70%
发文量
661
期刊介绍: Aims Bioengineering (ISSN 2306-5354) provides an advanced forum for the science and technology of bioengineering. It publishes original research papers, comprehensive reviews, communications and case reports. Our aim is to encourage scientists to publish their experimental and theoretical results in as much detail as possible. All aspects of bioengineering are welcomed from theoretical concepts to education and applications. There is no restriction on the length of the papers. The full experimental details must be provided so that the results can be reproduced. There are, in addition, four key features of this Journal: ● We are introducing a new concept in scientific and technical publications “The Translational Case Report in Bioengineering”. It is a descriptive explanatory analysis of a transformative or translational event. Understanding that the goal of bioengineering scholarship is to advance towards a transformative or clinical solution to an identified transformative/clinical need, the translational case report is used to explore causation in order to find underlying principles that may guide other similar transformative/translational undertakings. ● Manuscripts regarding research proposals and research ideas will be particularly welcomed. ● Electronic files and software regarding the full details of the calculation and experimental procedure, if unable to be published in a normal way, can be deposited as supplementary material. ● We also accept manuscripts communicating to a broader audience with regard to research projects financed with public funds. Scope ● Bionics and biological cybernetics: implantology; bio–abio interfaces ● Bioelectronics: wearable electronics; implantable electronics; “more than Moore” electronics; bioelectronics devices ● Bioprocess and biosystems engineering and applications: bioprocess design; biocatalysis; bioseparation and bioreactors; bioinformatics; bioenergy; etc. ● Biomolecular, cellular and tissue engineering and applications: tissue engineering; chromosome engineering; embryo engineering; cellular, molecular and synthetic biology; metabolic engineering; bio-nanotechnology; micro/nano technologies; genetic engineering; transgenic technology ● Biomedical engineering and applications: biomechatronics; biomedical electronics; biomechanics; biomaterials; biomimetics; biomedical diagnostics; biomedical therapy; biomedical devices; sensors and circuits; biomedical imaging and medical information systems; implants and regenerative medicine; neurotechnology; clinical engineering; rehabilitation engineering ● Biochemical engineering and applications: metabolic pathway engineering; modeling and simulation ● Translational bioengineering
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