Salt stress estimation in pumpkin germplasm based on maximum likelihood statistical modeling of the leaf color space distribution

IF 8.9 1区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY
Zhang Xinyan , Liu Quan , Li Shuai , Feng Huaxiong , Luo Liang , Tan Zuojun , Shen Huan , Bie Zhilong , Xie Jing
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Abstract

Breeding salt-tolerant pumpkin cultivars is crucial for improving crop quality and yield. In this study, a high-resolution imaging-based phenotyping platform was developed to capture true leaf images of pumpkin seedlings subjected to salt stress, and plant experts conducted field assessments to determine the severity of salt damage. After image preprocessing, binary mask images were generated, and the maximum likelihood values of normalized intensity were extracted in the red, green, and blue channels to establish a salt stress status index (β) for characterizing stress levels. The β value shows a strong correlation with SPAD value, which indicates that it can effectively reflect the chlorophyll content in leaves, thereby reflecting the physiological changes in leaves affected by salt stress. A leaf texture factor (α) was employed to investigate the directional characteristics of the leaf texture, it can facilitate the effective differentiation of the clusters identified in the clustering analysis and enhance model precision by incorporating detailed leaf structural features. The performance of machine learning, deep learning, and statistical modeling approaches was compared. Statistical model integrating β and α exhibited superior predictive accuracy, with a coefficient of determination, root mean square error, and mean absolute error of 0.901, 0.057, and 0.046, respectively, in the validation dataset. Accuracy assessment among 49 germplasm accessions achieved 95.65 %, demonstrating the model’s reliability. Compared to conventional salt injury assessment, this approach offers higher efficiency and greater objectivity, enabling rapid and accurate identification of salt stress levels in pumpkin seedlings. This study provides a rapid and efficient method for assessing salt stress in pumpkin seedlings, contributing to a deeper understanding of stress response mechanisms and facilitating the selection of salt-tolerant cultivars. Moreover, these findings offer a valuable reference for salt stress identification in other plant species.
基于叶片颜色空间分布最大似然统计模型的南瓜种质盐胁迫估算
选育耐盐南瓜品种是提高南瓜品质和产量的关键。在本研究中,开发了一个基于高分辨率成像的表型平台,以捕获受盐胁迫的南瓜幼苗的真实叶片图像,植物专家进行了实地评估,以确定盐损害的严重程度。图像预处理后生成二值掩模图像,在红、绿、蓝通道提取归一化强度的最大似然值,建立盐胁迫状态指数(β),表征胁迫水平。β值与SPAD值具有较强的相关性,表明其能有效反映叶片中叶绿素含量,从而反映盐胁迫下叶片的生理变化。利用叶片纹理因子(α)研究叶片纹理的方向性特征,可以有效区分聚类分析中识别出的聚类,并结合叶片的详细结构特征提高模型精度。比较了机器学习、深度学习和统计建模方法的性能。验证数据集的决定系数、均方根误差和平均绝对误差分别为0.901、0.057和0.046,显示出较好的预测精度。对49份种质资料的准确率评价达到95.65%,证明了模型的可靠性。与传统的盐害评估方法相比,该方法具有更高的效率和更大的客观性,可以快速准确地识别南瓜幼苗的盐胁迫水平。本研究提供了一种快速有效的方法来评估南瓜幼苗的盐胁迫,有助于更深入地了解胁迫响应机制,并有助于耐盐品种的选择。此外,这些发现也为其他植物的盐胁迫鉴定提供了有价值的参考。
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来源期刊
Computers and Electronics in Agriculture
Computers and Electronics in Agriculture 工程技术-计算机:跨学科应用
CiteScore
15.30
自引率
14.50%
发文量
800
审稿时长
62 days
期刊介绍: Computers and Electronics in Agriculture provides international coverage of advancements in computer hardware, software, electronic instrumentation, and control systems applied to agricultural challenges. Encompassing agronomy, horticulture, forestry, aquaculture, and animal farming, the journal publishes original papers, reviews, and applications notes. It explores the use of computers and electronics in plant or animal agricultural production, covering topics like agricultural soils, water, pests, controlled environments, and waste. The scope extends to on-farm post-harvest operations and relevant technologies, including artificial intelligence, sensors, machine vision, robotics, networking, and simulation modeling. Its companion journal, Smart Agricultural Technology, continues the focus on smart applications in production agriculture.
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