Genetic control of seed iron and zinc concentration in Rwandan common bean population revealed by the Genome Wide Association Study (GWAS).

IF 2.2 4区 农林科学 Q2 AGRONOMY
Breeding Science Pub Date : 2025-06-01 Epub Date: 2025-06-18 DOI:10.1270/jsbbs.24087
Floride Mukamuhirwa, Kenta Shirasawa, Ken Naito, Edouard Rurangwa, Viateur Ndayizeye, Alphonse Nyombayire, Jean Pierre Muhire, Mahalingam Govindaraj, Norikuni Ohtake, Keiichi Okazaki, Moeko Okada, Eigo Fukai
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引用次数: 0

Abstract

Common bean (Phaseolus vulgaris L.) is one of the most abundantly consumed legume crops as foods worldwide. In many African countries, this crop is an important staple food because of its rich nutrients. The Great Lakes region of Central Africa, which includes Rwanda, the nation with the highest per capita consumption of common beans worldwide, is known to be a center of common bean diversity in Africa. Increasing the amount of iron and zinc in common bean for biofortification has been a key breeding goal in Rwanda and other countries. In this study, using 192 accessions, including local landraces from Rwanda, breeding materials, released varieties, and others, we performed genome wide association studies (GWAS) to determine the loci governing those traits in addition to other agronomic traits. We identified a locus that was strongly associated with seed zinc concentration and candidate genes. The information might be a great help for marker-assisted breeding of this trait in common bean.

全基因组关联研究(GWAS)揭示的卢旺达普通豆群体种子铁和锌浓度的遗传控制。
普通豆(Phaseolus vulgaris L.)是世界上消费最丰富的豆类作物之一。在许多非洲国家,这种作物因其丰富的营养而成为重要的主食。众所周知,包括世界上人均普通豆消费量最高的国家卢旺达在内的中非大湖地区是非洲普通豆多样性的中心。在卢旺达和其他国家,增加普通豆中的铁和锌含量用于生物强化一直是一个关键的育种目标。在这项研究中,我们使用了192份材料,包括来自卢旺达的地方品种、育种材料、释放品种等,进行了基因组全关联研究(GWAS),以确定除其他农艺性状外,这些性状的控制位点。我们发现了一个与种子锌浓度和候选基因密切相关的位点。这些信息对普通豆的这一性状的标记辅助育种有很大的帮助。
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来源期刊
Breeding Science
Breeding Science 农林科学-农艺学
CiteScore
4.90
自引率
4.20%
发文量
37
审稿时长
1.5 months
期刊介绍: Breeding Science is published by the Japanese Society of Breeding. Breeding Science publishes research papers, notes and reviews related to breeding. Research Papers are standard original articles. Notes report new cultivars, breeding lines, germplasms, genetic stocks, mapping populations, database, software, and techniques significant and useful for breeding. Reviews summarize recent and historical events related breeding. Manuscripts should be submitted by corresponding author. Corresponding author must have obtained permission from all authors prior to submission. Correspondence, proofs, and charges of excess page and color figures should be handled by the corresponding author.
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