Targeting p53-MDM2 pathway with novel triazole-oxazole hybrids: a fragment-based drug discovery approach for next-generation cancer therapies.

IF 3.8 2区 化学 Q2 CHEMISTRY, APPLIED
Apurva Prajapati, Hitesh Patel
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引用次数: 0

Abstract

The tumor suppressor protein p53 plays a pivotal role in regulating key cellular processes, including cell cycle arrest, apoptosis, and DNA repair. Its negative regulator, MDM2, binds to the N-terminal domain of p53 and promotes its degradation, leading to the function inactivation of p53 in many cancers. Disrupting the p53-MDM2 interaction is thus an attractive therapeutic strategy, especially in tumors retaining wild-type p53. In this study, we applied a comprehensive in silico approach combining Fragment-Based Drug Discovery (FBDD), molecular docking, R-group enumeration, MM-GBSA binding energy estimation, ADMET prediction, MD simulations, DFT analysis to identify the novel p53-MDM2 inhibitors. Key findings demonstrated that the designed triazole-oxazole hybrids exhibited stable binding with critical MDM2 residues, improved solubility-driven pharmacokinetic behavior, and favorable electronic properties compared with reference inhibitor. Importantly, solubility-guided fragment design not only improved hit quality but also provided scaffolds with strong therapeutic potential. Overall, this study highlights triazole-oxazole hybrids as promising candidates for p53 reactivation and establishes a rational basis for their further biological evaluation in anticancer therapy.

靶向p53-MDM2通路的新型三唑-恶唑混合物:基于片段的新一代癌症治疗药物发现方法
肿瘤抑制蛋白p53在调节关键细胞过程中起关键作用,包括细胞周期阻滞、细胞凋亡和DNA修复。它的负调节因子MDM2结合到p53的n端结构域并促进其降解,导致许多癌症中p53的功能失活。因此,破坏p53- mdm2相互作用是一种有吸引力的治疗策略,特别是在保留野生型p53的肿瘤中。在本研究中,我们采用基于片段的药物发现(FBDD)、分子对接、r -基团枚举、MM-GBSA结合能估计、ADMET预测、MD模拟和DFT分析相结合的综合计算机方法来鉴定新的p53-MDM2抑制剂。主要研究结果表明,与参比抑制剂相比,设计的三唑-恶唑复合物与MDM2关键残基的结合稳定,改善了溶解度驱动的药代动力学行为,并且具有良好的电子特性。重要的是,溶解度引导的碎片设计不仅提高了命中质量,而且为支架提供了强大的治疗潜力。总的来说,本研究强调了三唑-恶唑复合物作为p53再激活的有希望的候选者,并为其在抗癌治疗中的进一步生物学评价奠定了合理的基础。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Molecular Diversity
Molecular Diversity 化学-化学综合
CiteScore
7.30
自引率
7.90%
发文量
219
审稿时长
2.7 months
期刊介绍: Molecular Diversity is a new publication forum for the rapid publication of refereed papers dedicated to describing the development, application and theory of molecular diversity and combinatorial chemistry in basic and applied research and drug discovery. The journal publishes both short and full papers, perspectives, news and reviews dealing with all aspects of the generation of molecular diversity, application of diversity for screening against alternative targets of all types (biological, biophysical, technological), analysis of results obtained and their application in various scientific disciplines/approaches including: combinatorial chemistry and parallel synthesis; small molecule libraries; microwave synthesis; flow synthesis; fluorous synthesis; diversity oriented synthesis (DOS); nanoreactors; click chemistry; multiplex technologies; fragment- and ligand-based design; structure/function/SAR; computational chemistry and molecular design; chemoinformatics; screening techniques and screening interfaces; analytical and purification methods; robotics, automation and miniaturization; targeted libraries; display libraries; peptides and peptoids; proteins; oligonucleotides; carbohydrates; natural diversity; new methods of library formulation and deconvolution; directed evolution, origin of life and recombination; search techniques, landscapes, random chemistry and more;
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