{"title":"Integrating spectroscopy with machine learning and deep learning for monitoring mung plant responses to silicon dioxide nanoparticles","authors":"Aishwary Awasthi , Aradhana Tripathi , Chhavi Baran , K.N. Uttam","doi":"10.1016/j.saa.2025.126963","DOIUrl":null,"url":null,"abstract":"<div><div>This study investigates the potential of integration of confocal micro-Raman and UV–Vis spectroscopy with machine learning and deep learning algorithms to assess biochemical responses of mung bean plants exposed to silicon dioxide nanoparticles (SiO<sub>2</sub> NPs) at varying concentrations. The analysis of acquired Raman spectral data reveals a concentration dependent pattern where low concentrations (0.2–0.6 mM) reduce the intensities of key biomolecules such as carotenoids, lignin, pectin, protein, carbohydrate, and cellulose, while higher concentrations (1.2–1.4 mM) trigger enhancement in intensities. The estimation of photosynthetic pigments using UV–Vis spectroscopy complements the Raman spectroscopy results, with chlorophyll <em>a</em>nd carotenoid levels decreasing at lower concentrations before significantly increasing. Among computational approaches, the application of dimensionality reduction techniques such as LDA- significantly improve the performance of clustering algorithms learnings like AGNES (RI = 1.00), DBSCAN (RI = 0.99), and k-means (RI = 1.00) and deep learning models, achieving high classification accuracy. Supervised algorithms like random forest and support vector machine perform optimally without dimensionality reduction, showing accuracies of 78 % and 79 % respectively. This integrated spectroscopy-computational approach offers a non-invasive, label-free, and robust framework for monitoring plant-nanomaterial interactions.</div></div>","PeriodicalId":433,"journal":{"name":"Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy","volume":"347 ","pages":"Article 126963"},"PeriodicalIF":4.6000,"publicationDate":"2025-09-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy","FirstCategoryId":"92","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1386142525012703","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"SPECTROSCOPY","Score":null,"Total":0}
引用次数: 0
Abstract
This study investigates the potential of integration of confocal micro-Raman and UV–Vis spectroscopy with machine learning and deep learning algorithms to assess biochemical responses of mung bean plants exposed to silicon dioxide nanoparticles (SiO2 NPs) at varying concentrations. The analysis of acquired Raman spectral data reveals a concentration dependent pattern where low concentrations (0.2–0.6 mM) reduce the intensities of key biomolecules such as carotenoids, lignin, pectin, protein, carbohydrate, and cellulose, while higher concentrations (1.2–1.4 mM) trigger enhancement in intensities. The estimation of photosynthetic pigments using UV–Vis spectroscopy complements the Raman spectroscopy results, with chlorophyll and carotenoid levels decreasing at lower concentrations before significantly increasing. Among computational approaches, the application of dimensionality reduction techniques such as LDA- significantly improve the performance of clustering algorithms learnings like AGNES (RI = 1.00), DBSCAN (RI = 0.99), and k-means (RI = 1.00) and deep learning models, achieving high classification accuracy. Supervised algorithms like random forest and support vector machine perform optimally without dimensionality reduction, showing accuracies of 78 % and 79 % respectively. This integrated spectroscopy-computational approach offers a non-invasive, label-free, and robust framework for monitoring plant-nanomaterial interactions.
期刊介绍:
Spectrochimica Acta, Part A: Molecular and Biomolecular Spectroscopy (SAA) is an interdisciplinary journal which spans from basic to applied aspects of optical spectroscopy in chemistry, medicine, biology, and materials science.
The journal publishes original scientific papers that feature high-quality spectroscopic data and analysis. From the broad range of optical spectroscopies, the emphasis is on electronic, vibrational or rotational spectra of molecules, rather than on spectroscopy based on magnetic moments.
Criteria for publication in SAA are novelty, uniqueness, and outstanding quality. Routine applications of spectroscopic techniques and computational methods are not appropriate.
Topics of particular interest of Spectrochimica Acta Part A include, but are not limited to:
Spectroscopy and dynamics of bioanalytical, biomedical, environmental, and atmospheric sciences,
Novel experimental techniques or instrumentation for molecular spectroscopy,
Novel theoretical and computational methods,
Novel applications in photochemistry and photobiology,
Novel interpretational approaches as well as advances in data analysis based on electronic or vibrational spectroscopy.