Reshaping Protein-Based Nanoparticles: Innovative Artificial Intelligence-Driven Strategies for Structural Design and Applications

IF 4.4 Q2 ENGINEERING, BIOMEDICAL
Mohammad Mahmoudi Gomari, Mehdi Alidadi, Neda Rostami, Sidi A. Bencherif
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Abstract

Nanoparticles (NPs) have become a pivotal technology in biomedical research due to their unique physicochemical properties and nanoscale size, allowing for targeted applications. Among NP materials, proteins and their derivatives stand out for their biocompatibility, engineering flexibility, and inherent biological functions, making them especially attractive for NP design. However, the structural and biochemical complexity of proteins has historically presented challenges in NP development. Recent advancements in artificial intelligence (AI) have transformed this field. Neural network models such as AlphaFold, ProteinMPNN, and RoseTTAFold, along with protein language models like evolutionary scale modeling, enable the design of protein-based NPs (PNPs) with diverse symmetries, shapes, and functionalities. These AI-driven approaches address traditional limitations, unlocking new possibilities in nanomedicine. This review explores the transformative role of AI in PNP design, emphasizing its potential to broaden applications, solve challenges, and drive innovative solutions in biotechnology and medical research.

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重塑蛋白质纳米颗粒:结构设计和应用的创新人工智能驱动策略
纳米粒子(NPs)由于其独特的物理化学性质和纳米级尺寸,使其具有针对性的应用,已成为生物医学研究中的关键技术。在NP材料中,蛋白质及其衍生物因其生物相容性、工程灵活性和内在的生物功能而脱颖而出,这使得它们对NP设计特别有吸引力。然而,蛋白质的结构和生化复杂性一直是NP发展的挑战。人工智能(AI)的最新进展已经改变了这一领域。神经网络模型(如AlphaFold、ProteinMPNN和RoseTTAFold)以及蛋白质语言模型(如进化尺度建模)使基于蛋白质的NPs (PNPs)具有不同的对称性、形状和功能。这些人工智能驱动的方法解决了传统的局限性,为纳米医学开辟了新的可能性。本文探讨了人工智能在PNP设计中的变革性作用,强调了其在生物技术和医学研究中扩大应用、解决挑战和推动创新解决方案的潜力。
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来源期刊
Advanced Nanobiomed Research
Advanced Nanobiomed Research nanomedicine, bioengineering and biomaterials-
CiteScore
5.00
自引率
5.90%
发文量
87
审稿时长
21 weeks
期刊介绍: Advanced NanoBiomed Research will provide an Open Access home for cutting-edge nanomedicine, bioengineering and biomaterials research aimed at improving human health. The journal will capture a broad spectrum of research from increasingly multi- and interdisciplinary fields of the traditional areas of biomedicine, bioengineering and health-related materials science as well as precision and personalized medicine, drug delivery, and artificial intelligence-driven health science. The scope of Advanced NanoBiomed Research will cover the following key subject areas: ▪ Nanomedicine and nanotechnology, with applications in drug and gene delivery, diagnostics, theranostics, photothermal and photodynamic therapy and multimodal imaging. ▪ Biomaterials, including hydrogels, 2D materials, biopolymers, composites, biodegradable materials, biohybrids and biomimetics (such as artificial cells, exosomes and extracellular vesicles), as well as all organic and inorganic materials for biomedical applications. ▪ Biointerfaces, such as anti-microbial surfaces and coatings, as well as interfaces for cellular engineering, immunoengineering and 3D cell culture. ▪ Biofabrication including (bio)inks and technologies, towards generation of functional tissues and organs. ▪ Tissue engineering and regenerative medicine, including scaffolds and scaffold-free approaches, for bone, ligament, muscle, skin, neural, cardiac tissue engineering and tissue vascularization. ▪ Devices for healthcare applications, disease modelling and treatment, such as diagnostics, lab-on-a-chip, organs-on-a-chip, bioMEMS, bioelectronics, wearables, actuators, soft robotics, and intelligent drug delivery systems. with a strong focus on applications of these fields, from bench-to-bedside, for treatment of all diseases and disorders, such as infectious, autoimmune, cardiovascular and metabolic diseases, neurological disorders and cancer; including pharmacology and toxicology studies.
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