Ensemble learning of the atrial fibre orientation with physics-informed neural networks.

IF 4.4 2区 医学 Q1 NEUROSCIENCES
Efraín Magaña, Simone Pezzuto, Francisco Sahli Costabal
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引用次数: 0

Abstract

The anisotropic structure of the myocardium is a key determinant of the cardiac function. To date there is no imaging modality to assess in vivo the cardiac fibre structure. We recently proposed Fibernet, a method for the automatic identification of the anisotropic conduction - and thus fibres - in the atria from local electrical recordings. Fibernet uses cardiac activation as recorded during electroanatomical mappings to infer local conduction properties using physics-informed neural networks. In this work we extend Fibernet to cope with the uncertainty in the estimated fibre field. Specifically we use an ensemble of neural networks to produce multiple samples, all fitting the observed data, and compute posterior statistics. We also introduce a methodology to select the best fibre orientation members and define the input of the neural networks directly on the atrial surface. With these improvements we outperform the previous methodology in terms of fibre orientation error in eight different atrial anatomies. Currently our approach can estimate the fibre orientation and conduction velocities in under 7 min with quantified uncertainty, which opens the door to its application in clinical practice. We hope the proposed methodology will enable further personalisation of cardiac digital twins for precision medicine. KEY POINTS: The direction of heart muscle fibres strongly affects how electrical signals travel, but current imaging methods cannot measure these fibres inside the living atria. We improved our previous method (Fibernet) by introducing Δ $\Delta$ -Fibernet, which is more accurate and can estimate uncertainty in the results. Δ $\Delta$ -Fibernet works directly on the surface of the heart and includes a new approach to select the most reliable fibre direction. The method produces results in under 7 min and could support personalised treatment planning for heart rhythm disorders.

基于物理信息的神经网络的心房纤维定向集成学习。
心肌的各向异性结构是心功能的关键决定因素。到目前为止,还没有影像学方法来评估体内的心脏纤维结构。我们最近提出了Fibernet,这是一种从局部电记录中自动识别心房各向异性传导和纤维的方法。Fibernet利用电解剖映射过程中记录的心脏活动,利用物理信息神经网络推断局部传导特性。在这项工作中,我们扩展了Fibernet,以应对估计光纤场中的不确定性。具体来说,我们使用神经网络的集合来产生多个样本,所有样本都拟合观察到的数据,并计算后验统计。我们还介绍了一种选择最佳纤维取向成员的方法,并定义了神经网络直接在心房表面上的输入。有了这些改进,我们在八种不同心房解剖的纤维取向误差方面优于以前的方法。目前,我们的方法可以在7分钟内估计出纤维取向和传导速度,并具有量化的不确定性,这为其在临床实践中的应用打开了大门。我们希望提出的方法将使心脏数字双胞胎进一步个性化,用于精准医疗。重点:心肌纤维的方向强烈影响电信号的传播方式,但目前的成像方法无法测量活心房内的这些纤维。我们通过引入Δ $\Delta$ -Fibernet改进了之前的方法(Fibernet),该方法更准确,可以估计结果中的不确定性。Δ $\Delta$ -Fibernet直接在心脏表面工作,包括一种选择最可靠的纤维方向的新方法。该方法可在7分钟内产生结果,并可支持心律失常的个性化治疗计划。
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来源期刊
Journal of Physiology-London
Journal of Physiology-London 医学-神经科学
CiteScore
9.70
自引率
7.30%
发文量
817
审稿时长
2 months
期刊介绍: The Journal of Physiology publishes full-length original Research Papers and Techniques for Physiology, which are short papers aimed at disseminating new techniques for physiological research. Articles solicited by the Editorial Board include Perspectives, Symposium Reports and Topical Reviews, which highlight areas of special physiological interest. CrossTalk articles are short editorial-style invited articles framing a debate between experts in the field on controversial topics. Letters to the Editor and Journal Club articles are also published. All categories of papers are subjected to peer reivew. The Journal of Physiology welcomes submitted research papers in all areas of physiology. Authors should present original work that illustrates new physiological principles or mechanisms. Papers on work at the molecular level, at the level of the cell membrane, single cells, tissues or organs and on systems physiology are all acceptable. Theoretical papers and papers that use computational models to further our understanding of physiological processes will be considered if based on experimentally derived data and if the hypothesis advanced is directly amenable to experimental testing. While emphasis is on human and mammalian physiology, work on lower vertebrate or invertebrate preparations may be suitable if it furthers the understanding of the functioning of other organisms including mammals.
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