{"title":"Metabolomic profiling and machine learning-based biomarker identification for oligoasthenozoospermia.","authors":"Jinli Li, Tangzhen Zhao, Mengmeng Ma, Pengcheng Kong, Yuping Fan, Xiaoming Teng, Yi Guo","doi":"10.1007/s11306-025-02333-0","DOIUrl":null,"url":null,"abstract":"<p><strong>Introduction and objectives: </strong>Oligoasthenozoospermia, characterized by a low sperm count and impaired progressive motility, significantly contributes to male infertility. This study examines the metabolic disparities between individuals with oligoasthenozoospermia (n = 30) and healthy controls (n = 30) utilizing ultra-high-performance liquid chromatography-quadrupole time-of-flight mass spectrometry (UPLC-Q-TOF/MS).</p><p><strong>Methods: </strong>A total of 1,331 metabolites were identified in positive ion mode and 870 in negative ion mode, with differential analysis indicating 211 significantly different metabolites between the two groups. Pathway analysis identified key metabolic pathways, including the pentose phosphate pathway, TCA cycle, glycerophospholipid metabolism, and fatty acid metabolism. Subsequently, various machine learning models, including Logistic Regression (LR), Random Forest (RF), and Support Vector Machine (SVM) were employed to assess the predictive capability of the identified metabolites, with 1-palmitoyl-2-docosahexaenoyl-sn-glycero-3-phosphocholine and [6]-gingerol demonstrating the highest predictive performance.</p><p><strong>Results: </strong>The diagnostic model, developed using LR, attained high sensitivity (0.93), specificity (1), and accuracy (0.97), with an AUC of 0.998 in the training set and 0.963 in the test set.</p><p><strong>Conclusion: </strong>These findings offer critical insights into the metabolic changes associated with oligoasthenozoospermia and establish a dependable diagnostic framework for differentiating it from controls.</p>","PeriodicalId":18506,"journal":{"name":"Metabolomics","volume":"21 5","pages":"137"},"PeriodicalIF":3.3000,"publicationDate":"2025-09-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Metabolomics","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1007/s11306-025-02333-0","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"ENDOCRINOLOGY & METABOLISM","Score":null,"Total":0}
引用次数: 0
Abstract
Introduction and objectives: Oligoasthenozoospermia, characterized by a low sperm count and impaired progressive motility, significantly contributes to male infertility. This study examines the metabolic disparities between individuals with oligoasthenozoospermia (n = 30) and healthy controls (n = 30) utilizing ultra-high-performance liquid chromatography-quadrupole time-of-flight mass spectrometry (UPLC-Q-TOF/MS).
Methods: A total of 1,331 metabolites were identified in positive ion mode and 870 in negative ion mode, with differential analysis indicating 211 significantly different metabolites between the two groups. Pathway analysis identified key metabolic pathways, including the pentose phosphate pathway, TCA cycle, glycerophospholipid metabolism, and fatty acid metabolism. Subsequently, various machine learning models, including Logistic Regression (LR), Random Forest (RF), and Support Vector Machine (SVM) were employed to assess the predictive capability of the identified metabolites, with 1-palmitoyl-2-docosahexaenoyl-sn-glycero-3-phosphocholine and [6]-gingerol demonstrating the highest predictive performance.
Results: The diagnostic model, developed using LR, attained high sensitivity (0.93), specificity (1), and accuracy (0.97), with an AUC of 0.998 in the training set and 0.963 in the test set.
Conclusion: These findings offer critical insights into the metabolic changes associated with oligoasthenozoospermia and establish a dependable diagnostic framework for differentiating it from controls.
期刊介绍:
Metabolomics publishes current research regarding the development of technology platforms for metabolomics. This includes, but is not limited to:
metabolomic applications within man, including pre-clinical and clinical
pharmacometabolomics for precision medicine
metabolic profiling and fingerprinting
metabolite target analysis
metabolomic applications within animals, plants and microbes
transcriptomics and proteomics in systems biology
Metabolomics is an indispensable platform for researchers using new post-genomics approaches, to discover networks and interactions between metabolites, pharmaceuticals, SNPs, proteins and more. Its articles go beyond the genome and metabolome, by including original clinical study material together with big data from new emerging technologies.