Seasonal dynamics and genetic diversity of human rhinoviruses in patients with acute respiratory infection in Bangkok in 2024

IF 2.5 4区 医学 Q3 VIROLOGY
Jiratchaya Puenpa, Sovida Dara, Preeyaporn Vichaiwattana, Ratchadawan Aeemjinda, Yong Poovorawan
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引用次数: 0

Abstract

Human rhinoviruses (HRVs) are significant contributors to respiratory illnesses, particularly acute respiratory infections (ARIs). In this study, we investigated the prevalence and genotypes of HRV circulating in Bangkok in 2024. Nasopharyngeal swabs were collected from 8,097 patients hospitalized with ARIs, resulting in a 14.5% HRV positivity rate (n = 1,320). Among these, children under 12 years accounted for the largest proportion (54.5%), highlighting a substantial disease burden in this age group. Molecular typing was performed on a subset of 360 HRV-positive samples. HRV-A was the most frequently detected type (64.4%), followed by HRV-C (33.1%) and HRV-B (2.5%). Seasonal variation was observed, with HRV-A predominating during the rainy season. Genotyping revealed diverse circulating strains, with HRV-C42, HRV-A73, and HRV-C32 among the most prevalent genotypes, indicating a shift from previously identified strains. Phylogenetic analysis demonstrated that circulating HRV strains in Bangkok share close genetic relationships with isolates from other countries, suggesting ongoing global transmission dynamics. These findings highlight the evolving landscape of HRV infections and underscore the importance of ongoing surveillance and genetic characterization to monitor circulating strains. This information is crucial for informing public-health strategies aimed at controlling respiratory infections, particularly among vulnerable populations such as children and the elderly.

2024年曼谷急性呼吸道感染患者鼻病毒的季节性动态和遗传多样性
人类鼻病毒(hrv)是导致呼吸道疾病,特别是急性呼吸道感染(ARIs)的重要因素。在这项研究中,我们调查了2024年在曼谷流行的HRV的流行情况和基因型。从8097例ARIs住院患者中收集鼻咽拭子,结果HRV阳性率为14.5% (n = 1320)。其中,12岁以下儿童所占比例最大(54.5%),突出表明这一年龄组的疾病负担很大。对360例hrv阳性样本进行分子分型。HRV-A是最常见的检测类型(64.4%),其次是HRV-C(33.1%)和HRV-B(2.5%)。观察到季节变化,HRV-A在雨季占优势。基因分型显示了多种循环菌株,HRV-C42、HRV-A73和HRV-C32是最普遍的基因型,表明与以前鉴定的菌株发生了转变。系统发育分析表明,曼谷流行的HRV毒株与来自其他国家的分离株具有密切的遗传关系,表明正在进行的全球传播动态。这些发现突出了HRV感染的演变情况,并强调了持续监测和遗传表征对监测流行毒株的重要性。这一信息对于宣传旨在控制呼吸道感染的公共卫生战略至关重要,特别是在儿童和老年人等弱势群体中。
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来源期刊
Archives of Virology
Archives of Virology 医学-病毒学
CiteScore
5.10
自引率
7.40%
发文量
324
审稿时长
4.5 months
期刊介绍: Archives of Virology publishes original contributions from all branches of research on viruses, virus-like agents, and virus infections of humans, animals, plants, insects, and bacteria. Coverage spans a broad spectrum of topics, from descriptions of newly discovered viruses, to studies of virus structure, composition, and genetics, to studies of virus interactions with host cells, organisms and populations. Studies employ molecular biologic, molecular genetics, and current immunologic and epidemiologic approaches. Contents include studies on the molecular pathogenesis, pathophysiology, and genetics of virus infections in individual hosts, and studies on the molecular epidemiology of virus infections in populations. Also included are studies involving applied research such as diagnostic technology development, monoclonal antibody panel development, vaccine development, and antiviral drug development.Archives of Virology wishes to publish obituaries of recently deceased well-known virologists and leading figures in virology.
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