Jeong Min Kim, Byeong Jun Choi, Hülya Bayburt, Dong Min Han, Che Ok Jeon
{"title":"Aquimarina rhodophyticola sp. nov. and Aquimarina besae sp. nov., Isolated from Marine Red Algae.","authors":"Jeong Min Kim, Byeong Jun Choi, Hülya Bayburt, Dong Min Han, Che Ok Jeon","doi":"10.1007/s00284-025-04504-7","DOIUrl":null,"url":null,"abstract":"<p><p>Two Gram-negative, oxidase- and catalase-positive, non-motile, rod-shaped aerobic bacteria, designated strains W85ᵀ and SS2-1ᵀ, were isolated from marine red algae. Strain W85ᵀ grew optimally at 30 °C, pH 7.0, and 4.0% (w/v) NaCl, while strain SS2-1ᵀ grew optimally at 25-30 °C, pH 7.0, and 2.0-3.0% NaCl. Both strains contained menaquinone-6 as the sole respiratory quinone and shared major fatty acids, including iso-C<sub>15:0</sub>, summed feature 9 (C<sub>16:0</sub> 10-methyl and/or iso-C<sub>17:1</sub> ω9c), and iso-C<sub>15:1</sub> G, with iso-C<sub>15:0</sub> 3-OH additionally present in strain W85ᵀ. The major polar lipids were phosphatidylethanolamine and diphosphatidylglycerol. The complete genomes of strains W85ᵀ (3.67 Mb, 3,151 genes) and SS2-1ᵀ (5.14 Mb, 4,564 genes) had a DNA G + C content of 34.1%. Genome annotation revealed that strain SS2-1ᵀ harbored more carbohydrate-active enzymes (129 genes) than W85ᵀ (60 genes), suggesting enhanced polysaccharide-degrading capacity. Ecological distribution analysis indicated that strains W85ᵀ and SS2-1ᵀ occupy distinct ecological niches, implying potential functional specialization. Both strains shared 95.0% 16S rRNA gene similarity, 71.9% average nucleotide identity (ANI), and 18.5% digital DNA-DNA hybridization (dDDH), all below species-level thresholds. Phylogenetic analyses based on 16S rRNA gene and whole-genome sequences confirmed that strains W85ᵀ and SS2-1ᵀ form distinct lineages within the genus Aquimarina. Furthermore, ANI and dDDH values between each strain and other type strains were also well below the species delineation thresholds. Based on phenotypic, chemotaxonomic, genomic, and ecological characteristics, strains W85ᵀ and SS2-1ᵀ are proposed as Aquimarina rhodophyticola sp. nov. (W85ᵀ = KACC 23858ᵀ = DSM 119937ᵀ) and Aquimarina besae sp. nov. (SS2-1ᵀ = KACC 23859ᵀ = DSM 119931ᵀ), respectively.</p>","PeriodicalId":11360,"journal":{"name":"Current Microbiology","volume":"82 11","pages":"504"},"PeriodicalIF":2.6000,"publicationDate":"2025-09-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Current Microbiology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1007/s00284-025-04504-7","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
Two Gram-negative, oxidase- and catalase-positive, non-motile, rod-shaped aerobic bacteria, designated strains W85ᵀ and SS2-1ᵀ, were isolated from marine red algae. Strain W85ᵀ grew optimally at 30 °C, pH 7.0, and 4.0% (w/v) NaCl, while strain SS2-1ᵀ grew optimally at 25-30 °C, pH 7.0, and 2.0-3.0% NaCl. Both strains contained menaquinone-6 as the sole respiratory quinone and shared major fatty acids, including iso-C15:0, summed feature 9 (C16:0 10-methyl and/or iso-C17:1 ω9c), and iso-C15:1 G, with iso-C15:0 3-OH additionally present in strain W85ᵀ. The major polar lipids were phosphatidylethanolamine and diphosphatidylglycerol. The complete genomes of strains W85ᵀ (3.67 Mb, 3,151 genes) and SS2-1ᵀ (5.14 Mb, 4,564 genes) had a DNA G + C content of 34.1%. Genome annotation revealed that strain SS2-1ᵀ harbored more carbohydrate-active enzymes (129 genes) than W85ᵀ (60 genes), suggesting enhanced polysaccharide-degrading capacity. Ecological distribution analysis indicated that strains W85ᵀ and SS2-1ᵀ occupy distinct ecological niches, implying potential functional specialization. Both strains shared 95.0% 16S rRNA gene similarity, 71.9% average nucleotide identity (ANI), and 18.5% digital DNA-DNA hybridization (dDDH), all below species-level thresholds. Phylogenetic analyses based on 16S rRNA gene and whole-genome sequences confirmed that strains W85ᵀ and SS2-1ᵀ form distinct lineages within the genus Aquimarina. Furthermore, ANI and dDDH values between each strain and other type strains were also well below the species delineation thresholds. Based on phenotypic, chemotaxonomic, genomic, and ecological characteristics, strains W85ᵀ and SS2-1ᵀ are proposed as Aquimarina rhodophyticola sp. nov. (W85ᵀ = KACC 23858ᵀ = DSM 119937ᵀ) and Aquimarina besae sp. nov. (SS2-1ᵀ = KACC 23859ᵀ = DSM 119931ᵀ), respectively.
期刊介绍:
Current Microbiology is a well-established journal that publishes articles in all aspects of microbial cells and the interactions between the microorganisms, their hosts and the environment.
Current Microbiology publishes original research articles, short communications, reviews and letters to the editor, spanning the following areas:
physiology, biochemistry, genetics, genomics, biotechnology, ecology, evolution, morphology, taxonomy, diagnostic methods, medical and clinical microbiology and immunology as applied to microorganisms.