Aquimarina rhodophyticola sp. nov. and Aquimarina besae sp. nov., Isolated from Marine Red Algae.

IF 2.6 3区 生物学 Q3 MICROBIOLOGY
Jeong Min Kim, Byeong Jun Choi, Hülya Bayburt, Dong Min Han, Che Ok Jeon
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引用次数: 0

Abstract

Two Gram-negative, oxidase- and catalase-positive, non-motile, rod-shaped aerobic bacteria, designated strains W85ᵀ and SS2-1ᵀ, were isolated from marine red algae. Strain W85ᵀ grew optimally at 30 °C, pH 7.0, and 4.0% (w/v) NaCl, while strain SS2-1ᵀ grew optimally at 25-30 °C, pH 7.0, and 2.0-3.0% NaCl. Both strains contained menaquinone-6 as the sole respiratory quinone and shared major fatty acids, including iso-C15:0, summed feature 9 (C16:0 10-methyl and/or iso-C17:1 ω9c), and iso-C15:1 G, with iso-C15:0 3-OH additionally present in strain W85ᵀ. The major polar lipids were phosphatidylethanolamine and diphosphatidylglycerol. The complete genomes of strains W85ᵀ (3.67 Mb, 3,151 genes) and SS2-1ᵀ (5.14 Mb, 4,564 genes) had a DNA G + C content of 34.1%. Genome annotation revealed that strain SS2-1ᵀ harbored more carbohydrate-active enzymes (129 genes) than W85ᵀ (60 genes), suggesting enhanced polysaccharide-degrading capacity. Ecological distribution analysis indicated that strains W85ᵀ and SS2-1ᵀ occupy distinct ecological niches, implying potential functional specialization. Both strains shared 95.0% 16S rRNA gene similarity, 71.9% average nucleotide identity (ANI), and 18.5% digital DNA-DNA hybridization (dDDH), all below species-level thresholds. Phylogenetic analyses based on 16S rRNA gene and whole-genome sequences confirmed that strains W85ᵀ and SS2-1ᵀ form distinct lineages within the genus Aquimarina. Furthermore, ANI and dDDH values between each strain and other type strains were also well below the species delineation thresholds. Based on phenotypic, chemotaxonomic, genomic, and ecological characteristics, strains W85ᵀ and SS2-1ᵀ are proposed as Aquimarina rhodophyticola sp. nov. (W85ᵀ = KACC 23858ᵀ = DSM 119937ᵀ) and Aquimarina besae sp. nov. (SS2-1ᵀ = KACC 23859ᵀ = DSM 119931ᵀ), respectively.

从海洋红藻中分离的红藻水合水合藻(Aquimarina rhodophyticola sp. 11 .)
从海洋红藻中分离到2株革兰氏阴性、氧化酶和过氧化氢酶阳性、无运动的杆状需氧菌,分别命名为菌株W85和SS2-1。菌株W85在30°C、pH 7.0和4.0% (w/v) NaCl条件下生长最佳,菌株SS2-1在25-30°C、pH 7.0和2.0-3.0% NaCl条件下生长最佳。这两株菌株均含有甲基萘醌-6作为唯一的呼吸醌,并具有相同的主要脂肪酸,包括iso-C15:0,总结特征9 (C16:0 10-甲基和/或iso-C17:1 ω9c)和iso-C15:1 G,菌株W85 - 0中还存在iso-C15:0 3-OH。主要极性脂质为磷脂酰乙醇胺和二磷脂酰甘油。菌株W85等位基因(3.67 Mb, 3151个基因)和SS2-1等位基因(5.14 Mb, 4564个基因)全基因组的DNA G + C含量为34.1%。基因组注释显示,菌株SS2-1 - ε比W85 - ε(60个基因)含有更多的碳水化合物活性酶(129个基因),表明其多糖降解能力增强。生态分布分析表明,菌株W85 +和SS2-1 +占据不同的生态位,具有潜在的功能特化。两株菌株16S rRNA基因相似性为95.0%,平均核苷酸同源性(ANI)为71.9%,数字DNA-DNA杂交(dDDH)为18.5%,均低于种水平阈值。基于16S rRNA基因和全基因组序列的系统发育分析证实菌株W85和SS2-1在Aquimarina属中形成不同的谱系。此外,每个菌株与其他类型菌株之间的ANI和dDDH值也远低于种划分阈值。基于表型、化学分类、基因组学和生态学特征,我们提出菌株W85和SS2-1分别为Aquimarina rhodophyticola sp. nov (W85 = KACC 23858和DSM 119937)和Aquimarina besae sp. nov (SS2-1和KACC 23859和DSM 119931)。
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来源期刊
Current Microbiology
Current Microbiology 生物-微生物学
CiteScore
4.80
自引率
3.80%
发文量
380
审稿时长
2.5 months
期刊介绍: Current Microbiology is a well-established journal that publishes articles in all aspects of microbial cells and the interactions between the microorganisms, their hosts and the environment. Current Microbiology publishes original research articles, short communications, reviews and letters to the editor, spanning the following areas: physiology, biochemistry, genetics, genomics, biotechnology, ecology, evolution, morphology, taxonomy, diagnostic methods, medical and clinical microbiology and immunology as applied to microorganisms.
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