Design of a Multi-epitope Antigen for Toxoplasmosis Diagnosis: An Immunoinformatics Approach

IF 1.5 3区 农林科学 Q4 PARASITOLOGY
Negar Asadi, Elham Yousefi, Sadegh Feizollahzadeh, Mortaza Taheri-Anganeh, Shahram Khademvatan, Gordon S. Howarth
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引用次数: 0

Abstract

Toxoplasma gondii, as an obligatory intracellular protozoan, can infect a diverse array of individuals and warm-blooded creatures. Considering the worldwide public health implications caused by T. gondii infection, it is an important goal to develop effective diagnostic tests or vaccines. The application of natural antigens derived from the parasite in these assessments encounters challenges, including the complexities of culturing the parasites, strain differences, and the high cost of kits produced based on natural antigens. The current bioinformatic study aimed to develop a multi-epitope T. gondii protein based on various immunoinformatic web servers to improve serodiagnosis. The linear and conformational B-cell epitope prediction of Surface Antigens 1(SAG1) and 2(SAG2), Dense granule proteins 2 (GRA2), 6 (GRA6), and 7 (GRA7), was conducted by the ABCpred and BepiPred servers, respectively. A variety of web servers were then accessed to predict antigenicity, solubility, and physicochemical properties, as well as to analyze secondary and tertiary structures, refine the 3D model, and validate the findings. Consequently, conformational B-cell epitopes were identified to explore potential protein-antibody interactions. In conclusion, further experimental evaluation is necessary for this multi-epitope construct for its subsequent incorporation in commercial serodiagnostic kits.

用于弓形虫病诊断的多表位抗原设计:免疫信息学方法
刚地弓形虫作为一种细胞内的原生动物,可以感染各种各样的个体和温血动物。考虑到弓形虫感染引起的全球公共卫生影响,开发有效的诊断测试或疫苗是一个重要目标。从寄生虫中提取的天然抗原在这些评估中的应用遇到了挑战,包括培养寄生虫的复杂性、品系差异和基于天然抗原生产的试剂盒的高成本。本生物信息学研究旨在开发基于多种免疫信息学web服务器的多表位弓形虫蛋白,以提高血清诊断水平。ABCpred和BepiPred服务器分别对表面抗原1(SAG1)和2(SAG2)、致密颗粒蛋白2(GRA2)、6 (GRA6)和7 (GRA7)的b细胞表位进行线性和构象预测。然后访问各种web服务器来预测抗原性、溶解度和物理化学性质,以及分析二级和三级结构,完善3D模型,并验证研究结果。因此,确定构象b细胞表位以探索潜在的蛋白质-抗体相互作用。总之,对这种多表位结构进行进一步的实验评估是必要的,以便随后将其纳入商业血清诊断试剂盒。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Acta Parasitologica
Acta Parasitologica 医学-寄生虫学
CiteScore
3.10
自引率
6.70%
发文量
149
审稿时长
6-12 weeks
期刊介绍: Acta Parasitologica is an international journal covering the latest advances in the subject. Acta Parasitologica publishes original papers on all aspects of parasitology and host-parasite relationships, including the latest discoveries in biochemical and molecular biology of parasites, their physiology, morphology, taxonomy and ecology, as well as original research papers on immunology, pathology, and epidemiology of parasitic diseases in the context of medical, veterinary and biological sciences. The journal also publishes short research notes, invited review articles, book reviews. The journal was founded in 1953 as "Acta Parasitologica Polonica" by the Polish Parasitological Society and since 1954 has been published by W. Stefanski Institute of Parasitology of the Polish Academy of Sciences in Warsaw. Since 1992 in has appeared as Acta Parasitologica in four issues per year.
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