Tracing priming effects in palsa peat carbon dynamics using a stable isotope-assisted metabolomics approach.

IF 3.9 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
Frontiers in Molecular Biosciences Pub Date : 2025-08-22 eCollection Date: 2025-01-01 DOI:10.3389/fmolb.2025.1621357
Christian Ayala-Ortiz, Moira Hough, Elizabeth K Eder, David W Hoyt, Rosalie K Chu, Jason Toyoda, Steven J Blazewicz, Patrick M Crill, Ruth Varner, Scott R Saleska, Virginia I Rich, Malak M Tfaily
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引用次数: 0

Abstract

Introduction: Peatlands store up to a third of global soil carbon, and in high latitudes their litter inputs are increasing and changing in composition under climate change. Although litter significantly influences peatland carbon and nutrient dynamics by changing the overall lability of peatland organic matter, the physicochemical mechanisms of this impact-and thus its full scope-remain poorly understood.

Methods: We applied multimodal metabolomics (UPLC-HRMS, 1H NMR) paired with 13C Stable Isotope-Assisted Metabolomics (SIAM) to track litter carbon and its potential priming effects on both existing soil organic matter and carbon gas emissions. Through this approach, we achieved molecule-specific tracking of carbon transformations at unprecedented detail.

Results: Our analysis revealed several key findings about carbon dynamics in palsa peat. Microbes responded rapidly to litter addition, producing a short-term increase in CO2 emissions, fueled nearly exclusively by transformations of litter carbon. Litter inputs significantly contributed to the organic nitrogen pool through amino acids and peptide derivatives, which served as readily accessible nutrient sources for microbial communities. We traced the fate of plant-derived polyphenols including flavonoids like rutin, finding evidence of their degradation through heterocyclic C-ring fission, while accumulation of some polyphenols suggested their role in limiting overall decomposition. The SIAM approach detected subtle molecular changes indicating minimal and transient priming activity that was undetectable through conventional gas measurements alone. This transient response was characterized by brief microbial stimulation followed by rapid return to baseline metabolism. Pre-existing peat organic matter remained relatively stable; significant priming of its consumption was not observed, nor was its structural alteration.

Discussion: This suggests that while litter inputs temporarily increase CO2 emissions, they don't sustain long-term acceleration of stored carbon decomposition or substantially decrease peat's carbon store capacity. Our findings demonstrate how technological advancements in analytical tools can provide a more detailed view of carbon cycling processes in complex soil systems.

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利用稳定同位素辅助代谢组学方法追踪泥炭碳动力学的启动效应。
导语:泥炭地储存了全球三分之一的土壤碳,在高纬度地区,它们的凋落物输入在气候变化的影响下正在增加和变化。尽管凋落物通过改变泥炭地有机质的整体不稳定性而显著影响泥炭地的碳和养分动态,但这种影响的物理化学机制及其全部范围仍然知之甚少。方法:采用多模式代谢组学(UPLC-HRMS, 1H NMR)与13C稳定同位素辅助代谢组学(SIAM)相结合的方法,追踪凋落物碳及其对现有土壤有机质和碳气体排放的潜在启动效应。通过这种方法,我们以前所未有的细节实现了对碳转化的分子特异性跟踪。结果:我们的分析揭示了帕尔萨泥炭碳动态的几个关键发现。微生物对凋落物的增加反应迅速,产生二氧化碳排放量的短期增加,几乎完全由凋落物碳的转化推动。凋落物输入通过氨基酸和肽衍生物对有机氮库的贡献显著,这些氨基酸和肽衍生物是微生物群落容易获得的营养来源。我们追踪了包括芦丁等类黄酮在内的植物源多酚的命运,发现了它们通过杂环c环裂变降解的证据,而一些多酚的积累表明它们在限制整体分解方面的作用。SIAM方法可以检测到细微的分子变化,表明通过常规气体测量无法检测到的微小和短暂的启动活动。这种短暂反应的特点是短暂的微生物刺激,随后迅速恢复到基线代谢。原有泥炭有机质保持相对稳定;没有观察到其消费的显著启动,也没有观察到其结构变化。讨论:这表明,虽然凋落物的投入暂时增加了二氧化碳的排放,但它们并不能维持储存的碳分解的长期加速,也不能大幅降低泥炭的碳储存能力。我们的研究结果表明,分析工具的技术进步如何能够提供复杂土壤系统中碳循环过程的更详细视图。
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来源期刊
Frontiers in Molecular Biosciences
Frontiers in Molecular Biosciences Biochemistry, Genetics and Molecular Biology-Biochemistry
CiteScore
7.20
自引率
4.00%
发文量
1361
审稿时长
14 weeks
期刊介绍: Much of contemporary investigation in the life sciences is devoted to the molecular-scale understanding of the relationships between genes and the environment — in particular, dynamic alterations in the levels, modifications, and interactions of cellular effectors, including proteins. Frontiers in Molecular Biosciences offers an international publication platform for basic as well as applied research; we encourage contributions spanning both established and emerging areas of biology. To this end, the journal draws from empirical disciplines such as structural biology, enzymology, biochemistry, and biophysics, capitalizing as well on the technological advancements that have enabled metabolomics and proteomics measurements in massively parallel throughput, and the development of robust and innovative computational biology strategies. We also recognize influences from medicine and technology, welcoming studies in molecular genetics, molecular diagnostics and therapeutics, and nanotechnology. Our ultimate objective is the comprehensive illustration of the molecular mechanisms regulating proteins, nucleic acids, carbohydrates, lipids, and small metabolites in organisms across all branches of life. In addition to interesting new findings, techniques, and applications, Frontiers in Molecular Biosciences will consider new testable hypotheses to inspire different perspectives and stimulate scientific dialogue. The integration of in silico, in vitro, and in vivo approaches will benefit endeavors across all domains of the life sciences.
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